LOCUS       HPVVS92L1     674 bp    DNA             VRL       15-NOV-1994
DEFINITION  Human Papillomavirus vs92-1 DNA, part of L1 ORF.
ACCESSION   X79949
KEYWORDS    capsid protein; L1 gene.
SOURCE      Human papillomavirus.
  ORGANISM  Human papillomavirus
            Viruses; dsDNA viruses, no RNA stage; Papovaviridae;
            Papillomavirus.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Shamanin,V., Glover,M., Rausch,C., Proby,C., Leigh,I.M., zur
            Hausen,H. and de Villiers,E.M.
  TITLE     Specific types of human papillomavirus found in benign
            proliferations and carcinomas of the skin in immunosuppressed
            patients
  JOURNAL   Cancer Res. 54 (17), 4610-4613 (1994)
  MEDLINE   94340583
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Shamanin,V.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-1994) to the EMBL/GenBank/DDBJ databases. V.A.
            Shamanin, Deutsches Krebsforschungszentrum, Im Neuenheimre Feld
            242, 69120 Heidelberg, FRG
COMMENT     HPVVS92 was isolated from a skin wart biopsy of a renal allograft
            patient, and appears likely to constitute a new type.  It was
            found in a search for HPV DNA in 118 skin lesions taken from 46
            renal allograft patients [1].  HPV-9 appears to be the most
            closely related known type.  The partial L1 sequences for
            HPVRTRX3 does not overlap with that of HPVVS92; from their
            similarity to HPV-9, it is possible that HPVVS73 and one of the
            other two isolates are from the same novel HPV type.
            NCBI gi: 562320
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Human papillomavirus"
                     /isolate="vs92-1"
                     /tissue_type="skin wart biopsy 72-3-E"
                     /clone="vs92-1"
     CDS             <1..>674
                     /gene="L1"
                     /note="NCBI gi: 562321"
                     /codon_start=1
                     /product="capsid protein L1"
                     /translation="SRGQPLGVGTSGHPLFNKVRDTENSGNYQAVSQDDRQNTSFDPK
                     QVQMFVIGCVPCMGEHWDKAKVCESEANNQQGLCPPIELKNSVIEDGDMFDIGFGNIN
                     NKALSYNKSDVSLDIVNEVCKYPDFLTMANDVYGDACFFFARREQCYARHYFVRGGNV
                     GDAIPDGAVQQDHNYYLPAQNAQQQHTLGNSIYYPTVSGSLVTSDAQLFNRPFWLQRA
                     QGQNNG"
BASE COUNT      223 a    110 c    141 g    200 t
ORIGIN      
        1 tcaaggggac agccattggg tgtaggaaca tcaggtcatc ctttatttaa caaagtcagg
       61 gatactgaaa actcaggtaa ctatcaagca gtttctcagg atgacagaca aaatacatct
      121 tttgatccta aacaagtgca aatgtttgtc attggctgtg tgccgtgtat gggtgaacat
      181 tgggacaaag ctaaggtttg tgaatcagaa gcaaataatc aacaaggctt atgtccaccc
      241 atagagttaa aaaattcagt aattgaagat ggagatatgt ttgatatagg ctttggaaat
      301 attaataaca aagcactatc ttataacaag tcagatgtta gtttagatat agttaatgaa
      361 gtgtgcaaat atccagactt tttaaccatg gctaatgatg tgtatggaga tgcttgtttt
      421 ttctttgcta gacgagaaca atgttatgcc agacattatt ttgttagggg aggcaatgtt
      481 ggcgatgcaa tccctgatgg agcagtacaa caggatcaca actattattt acctgcacaa
      541 aatgcacagc aacaacacac cttgggaaat tctatatatt atccaactgt tagtgggtct
      601 cttgtaacat ctgatgctca gttatttaat agaccatttt ggttacaacg tgctcaagga
      661 caaaacaacg gtat