ID HPV49 STANDARD; ds-DNA; VRL; 7560 bp. XX DE Human papillomavirus type 49 (HPV-49), complete genome. XX AC X74480 XX DT 04-OCT-1993 XX OS Human papillomavirus type 49 DNA. OC Human papillomavirus type 49 OC Viridae; ds-DNA nonenveloped viruses; Papovaviridae; OC Papillomavirus. XX RN [1] RP 1-7560 RA Egawa,K., Delius,H., Matsukura,T., Kawashima,M. and RA De Villiers,E.M.; RT "Two novel types of human papillomavirus, HPV63 and HPV65 RT comparisons of their distinct clinical and histological features RT and their DNA sequences to other HPV types"; RL Virology 194, 789-799 (1993). XX XX Submitted (27-JAN-1993) on tape to the EMBL Data Library by: H. XX Delius, Deutsches Krebsforschungszentrum, Abt ATV, Im Neuenheimer XX Feld 506, W -6900 Heidelberg, FRG. Clone = insert in EcoRI site of XX pGEM-4. XX XX FT KEY Location/Qualifiers FT CDS 200..616 FT /note="putative" FT /note="ORF E6 from bp 131 to 616" FT /product="transforming protein" FT /gene="E6" FT /note="putative" FT /codon_start=1 FT CDS 613..924 FT /note="putative" FT /note="ORF E7 from bp 595 to 924" FT /product="transforming protein" FT /gene="E7" FT /note="putative" FT /codon_start=1 FT CDS 911..2740 FT /note="putative" FT /note="ORF E1 from bp 824 to 2740" FT /product="replication protein" FT /gene="E1" FT /note="putative" FT /codon_start=1 FT CDS 2682..4148 FT /note="putative" FT /note="ORF E2 from bp 2652 to 4148" FT /product="regulatory protein" FT /gene="E2" FT /note="putative" FT /codon_start=1 FT CDS 3109..3903 FT /note="putative" FT /note="ORF E4 from bp 3103 to 3903" FT /gene="E4" FT /note="putative" FT /codon_start=1 FT CDS 4233..5798 FT /note="putative" FT /note="ORF L2 from bp 4194 to 5798" FT /product="minor capsid protein" FT /gene="L2" FT /note="putative" FT /codon_start=1 FT CDS 5811..7340 FT /note="putative" FT /note="ORF L1 from bp 5799 to 7340" FT /product="major capsid protein" FT /gene="L1" FT /note="putative" FT /codon_start=1 FT source 1..7560 FT /organism="Human papillomavirus type 49" FT /sequenced_mol="DNA" XX SQ SEQUENCE 7560 bp; 2366 a; 1436 c; 1672 g; 2086 t; ccacattcgt tccagctaca ttttggcgcc aactctttgg cagcaacacc agaacgataa 60 cggtaagttt caatcgggcg cggtcacatt atacttagtc atctcttgtg gttgttaaca 120 acaatcttga aacagatata catgtaaccg cttgcgtgct gtactttctt tattcttgga 180 aagaatacag acaggacaca tggctagacc tgttaaggta tgtgagctag cccaccactt 240 aaatatacct atttgggaag ttttgcttcc ttgtaatttt tgcacggggt ttctaacata 300 tcaggagttg ttagaatttg actataaaga ctttaatttg ctgtggaaag acggatttgt 360 ctttggttgt tgtgcagctt gtgcctatag atcagcatat cacgagttta ctaattatca 420 ccaagaaatt gtcgtaggca tcgaaataga aggacgagca gcggctaata ttgctgagat 480 agtagtcaga tgtctcattt gccttaagag gctagatttg ttggaaaagc ttgatatttg 540 tgcacagcac agagagtttc acagagttag aaataggtgg aaaggggtgt gtagacattg 600 cagagttata gaatgattgg gaaagaagtt acaataccag atataatact acaagaagag 660 tttggccagc ccattgacct gcaatgctac gagaatctaa cagctgaagc gccagctgaa 720 caagagttgg aggcagagga ggagcttatc caaggcatcc cttacaaagt tattgctact 780 tgtggcggcg gatgcggtgc cagactgcga gtcttcgtgt tagccactga cgctgctatt 840 agaagtttcc aagaactgct tctggaggaa ctgcaattct tgtgtcctca gtgtcgtgaa 900 gaaattcgga atggcggacg ataaaggtac tgatcccaaa gaagggtgta gcgagtggtt 960 tatagataat gaagcagact gtagtgattt agaaaatgat ttggaacaat tatttgatga 1020 aagcccaaag tccaatattt caaatttgtt aaatgatgag gaggatgtgg agcagggaaa 1080 ttcgcgagat ctgcttcgcc agcaggaatt tgaggagagc gcggagcaag tacaaaagtt 1140 aaaacgaaag tatttcagtc ctaaagcagt tcaacaactt agcccacggt tgcagtctat 1200 gtcaatatct ccgcgacaaa agtctaaacg aaggctattt gaggaggaca gcgggctgga 1260 attatcgggg ctcgaacagt ctttgactaa tgaaattgaa gatactcctg cggagctgga 1320 ggtaccggcg gcaacgccgg cagagcaggg tggtcaggga gagggcaatt tgcattataa 1380 agagttaatg cgatgcaata atagtcgtgc aaaattatta agtaaagtca aggaatattt 1440 tggtgtgggt ttttatgagt tagctagaca gtataaaagt gataaaacat gctgtaaaga 1500 ttgggtaatt gcagcctatg gcgtgcgaga agagctggta gaaagtgcaa aacaattact 1560 tttaaatcat tgttcctatg tgtggataaa tataaatggg attatgactt tatatttact 1620 gtgttttaat catgcaaaga gtagagaaac tgttggtaga ttgcttatgt caatactgga 1680 tgtacaatta ttgcaattaa tttgtgaacc accaaaacta agaagtgtgg tgtcagcact 1740 atactggtac aaaggcagta tggactcatc tgtgtatgct catggagcct atcctgattg 1800 gattgtaaat cagaccatga taagtcatca ggcagcagca gatgctatgc aatttgacct 1860 ttctgaaatg atacaatggg cctatgatag cgatctcaca gatgaagctg acattgcata 1920 tctttatgct aaaatggcaa atagtgactc taatgcaaga gcttggttag cacataataa 1980 tcaggcaagg tacttaagag aatgtgctca aatggttaga cattacagac ggggagaaat 2040 gagggatatg agtatgtctg agtggataca tcacagaata caacaagtag aaggggaagg 2100 ccattggtct gaaatagtta agtttataag atttcaagaa ataaacttta taatatttct 2160 ggatgcattt aaacagttta tacatggcaa acctaaaaaa agctgtttat taatacatgg 2220 gccgccggac tgtggcaagt caatgtttgc tatgtcatta ttaaaagttt taaaaggcaa 2280 ggtaatttca tttgtaaatg caaaaagtca attttggctg tctccacttt cagaatgtaa 2340 aatagggctg ttggatgatg ctaccgatcc ttgttggcaa tatatagata catatttaag 2400 aaatggtctc gatggaaatg ttgtaagtgt ggattgcaaa cataaaaccc ctatgcaaat 2460 taggttccca ccattgttaa taacttcaaa ttataatatt aaagctaatg ataaatataa 2520 gtttttgtac agtagaattg caatatttga atttaaacat aagttcccat tcaaagagga 2580 tggtacccct gtatttcaac ttactgacca aagctggaaa tctttttttg aaaggctttg 2640 gacacaatta gagctcagtg acccagaaga cgaggcagac aatggaggca ctcaacgctc 2700 gtttcaatgt actacaagag atgttaatgg acatttatga atcagggaaa gaggatcttg 2760 aaacacaaat agaacattgg aaactgttaa gacaggaaca agctttatta ttttttgcac 2820 gtaaacacag cataatgaga ctggggtatc aacccgtacc tccgatggca gtatctgaaa 2880 ccaaagccaa acaagctatt ggcatgatgc taactttgca aagcttgcaa aagtctcctt 2940 ttggaaaaga aaagtggact ttagtaaaca caagtcttga aacatacaat gcaccaccag 3000 cacagtgctt taaaaaaggt ccttataata tagaagttat atttgatgga gatcctgaaa 3060 atctaatggt atatactgct tggaaagaga tttattttgt agactcagat gatatgtggc 3120 aaaaggtgca aggtgaggtg gattatgcag gtgcatatta taaggatgga actatcaaac 3180 agtattatgt taccttcgct gatgatgctg ttagatatgg gacatctgga caatatgaag 3240 tccgcattaa caacgaaact gtgtttgctc ctgttactag ctccacccca ccatccacgg 3300 ggctacgaga atcctccaac gccagccccg ttcacgacac cgtcgacgag acacccacca 3360 gcaccacagc aaccaccacc accttcagca ccaccacagc cacagccaca gccacaggag 3420 cacctgaact ctcatccaaa accggtacca ggaaaggaag gtacgggcga aaagactcta 3480 gtcctacagc agcctccaac tccaggaaag aggtctcgcg acgacgatcc aggtctagaa 3540 ccaggacccg cagacgggaa gcgagcacct caaggtccca aaaagccagc cgttccagat 3600 ccagatccag atccacttcc agaggatcca gagggtccgg aggatctgtc acaacctcca 3660 gagattccag ccccaagaga acccgcaggg gcagagggag gggagggaga agtagaaggt 3720 cacccacccc cacctccacc agtaaacggg aaagaaggcg cagccggtca agggggggag 3780 agcctgtttc tggaggggtt ggcatctcgc ctgacaaggt gggatcaaga gtacaaacag 3840 ttagtggacg acatcttgga cgacttggaa ggttactgga ggaggctagc gatcctccag 3900 taatactttt gcgaggagac ccaaatattt taaaatgtta cagatacaga gataagaagc 3960 gtaaattagg tttagtaaaa cattatagta ccacctggtc atgggttggt gtagatggca 4020 atgaaagaat aggtagatca cgtatgcttt taagttttac ttcaaacagc actagatcac 4080 agtatgttaa aattatgaag ctccctaaag gtgtggaatg gtcttttggt aattttgata 4140 agctttaaca ttttgctaac atactaacgg tgcttgcact actaacacat taatctttta 4200 acatttttat attgcttttt tatttttata taatggtgcg tgctcgcaga acaaagcgag 4260 attctgtaac aaacatttac agaacctgca aacaggcagg aaactgtcct ccggatgttg 4320 ttaataaagt ggaacaaact acaattgctg accaaatatt aaaatttggc agcactggtg 4380 tgttttttgg tggtttggga ataggtacag gccgtggtac cggtggcagt actggctatg 4440 tacctatagg tgaaggccca gcaatacgtg ttgggggcac tccaagtgtt gttcgtccag 4500 gtatactccc tgaggctatt ggtccggcgg atatcattcc tattgatact gtcaatccaa 4560 ttgatccaaa tgcatcatct gtggtcccac tcactgacac aggacctgat ttgctacctg 4620 ggacaattga gactattgca gaagtgaacc ctgccccaga tattcctaga gttgacacat 4680 ctgttgtcac aacaagcaga ggctccagtg ctgtattgga ggttgcctct gaacccacac 4740 cacccactcg caccagaatt tccagaacac agtaccataa tccctctttt caaatattaa 4800 ctgaatctac accctctttg ggagaatctg cattaactga tcatgttgtt gttactagtg 4860 gttctggtgg tcaaccaata ggtggagtta caccagttga aatagaatta caagaacttc 4920 ctagcagata tacttttgaa atagaggaac ctacaccacc aagacgctct agtaccccac 4980 tacgcaacat cacacaagct gtaggaaatt taagaagatc actatataat aggcgactta 5040 ctcaacaagt aaatgtccag gatccattat tcttacaaca gccctcacgt ttagttcgct 5100 ttgcctttga taatcctgtg tttgaagaag aagttacaca aatatttgaa agggacgtag 5160 cagctgtaga agaacctcca gacagagact ttttagatat agcaaaatta agccgccctc 5220 tttactctga aacaccacag ggatatgtca gggtaagccg cttaggtaat agggcttcta 5280 ttagaacacg tagtggagct acagtagggg ctcaagtgca tttttataca gatcttagca 5340 caatcgatgc agaggagtct atagagttat cactattagg ggaacattct ggtgatgcta 5400 ctattgtcca aggcccagta gaaagctcat ttgtagattt aaatgttcag gaactgcctc 5460 aagtaataga agtagaccca gaacctactt tccactctga tgatttgcta ctggatgagc 5520 aaaatgaaga tttttctggc tcccagttag tttatggtag tggcaggcgt tctaccacat 5580 ttactgtacc ccgcttctct actcccagat ctgatacctt ttatgtacaa gatttggaag 5640 gttatgctgt gtcatatcct gaacgaagga attatccaga aattatttat cctcaacccg 5700 atttgccaac tgtaataatt catactgcag atacctctgg ggacttctat ttacatccaa 5760 gccttcgcag gcgaaaacgt aaacgcactt atttatgata tttctttcag atgacctcgc 5820 tatggttacc tgcaactggt aaggtatatc taccaccttc aacacctgtg gcaagggtac 5880 aaagcacgga tgaatacatt cagaggacag acatctacta tcatgctaat agtgatcgat 5940 tgttaactgt aggacatcca tattttgatg tgagagatac agcagacaat tctaaaattt 6000 tagtaccaaa ggtttcaggt aatcaatatc gagcctttag attactatta ccagatccca 6060 acagatttgc actagtagat atgaatatat ataacccaga aaaggaaaga ttagtatggg 6120 cctgtagagg cttagaaatt ggtcgtggcc agcctttagg tgttggtaca acaggacatc 6180 cattgtttaa caaagtcaaa gatactgaaa atgctaataa ctatatagta acttctaaag 6240 atgatagaca ggatacttca tttgacccta aacaggtaca aatgtttatc ataggttgta 6300 ctccttgtat gggtgagtac tgggacgctg ctaaaccttg tgatgcagat gctggtcagg 6360 gtaaatgccc tccattagaa ttaatcaatt cagttataca agatggtgat atgattgata 6420 taggttttgg taatatcaat aataagacat tatctgttaa cagatctgat gtcagtttgg 6480 atatagtaaa tgacatttgc aagtatcctg attttttaaa gatggcaaat gacatatatg 6540 gggatgcttg tttcttctat gctagacgtg aacaatgtta tgccaggcac ttctttgtta 6600 gaggtggtaa tgtaggggat gcgataccca atactgctgt aggtcaggat aacaattaca 6660 tattacctgc agcaagtcaa caggcccaaa atactcttgg cagctccatc tatttcccta 6720 ccgtcagtgg ctctttggta tctactgatg cgcagctatt caatagacct ttttggttac 6780 aaagagcaca gggtcacaac aatggaattt gctgggagaa tcagcttttt ataacagtgg 6840 ctgataatac cagaaatacc aattttacta ttagtgtaag tacggatggc cagacaccta 6900 cagaatatga cagtaccaag gttagagaat ttttaagaca tgtagaggaa tatgaaattt 6960 caattatatt acaattgtgt aaggtacctt tagaaccgga agtcctggca caaatcaatg 7020 ctatgaattc ttctatattg gaaaattggc aattgggatt tgttcctacc cctgataatc 7080 ctatacatga cacatatagg tatcttacat cacaggcaac acgatgccct gacaaacaac 7140 ctgctccaga aaggaaagat ccatatgagc agtataactt ttggactgta gatttaacag 7200 aaaaactgtc tttggatttg gatcaatatt ctttaggaag aaagttttta tttcaagctg 7260 ggctacaacg ggcttctaga gtgtctaaat cctctgctgc tagagcttcc acacggggta 7320 ttaaacgaaa acggagatga ccgttttcgg ttgctgggtc ttataataaa atattttata 7380 aactgttttg gtatgtgagg catgttttaa ccgagttcgt gactaagatt gattaaccca 7440 cctgcaaccg cacccggtta atcagattat aaaggtgcgc cggtgttcac ctctggctac 7500 ttggcagtta caagttcacc tctgccagaa gtgtgttttt gccaagacat ttgccaagta 7560 //