ID HPV36 STANDARD; ds-DNA; VRL; 7722 bp. XX DE Human papillomavirus type 36 (HPV36), complete genome. XX AC U31785 XX DT 04-JUL-1995 XX OS Human papillomavirus type 36 DNA. OC Human papillomavirus type 36;Viridae; ds-DNA nonenveloped viruses; OC Papovaviridae;Papillomavirus. XX RN [1] RP 1 - 7722 RA Delius,H; RT "Direct Submission;" RL Unpublished. XX RN [2] RP RA Kawashima,M., Favre,M., Jablonska,S., Obalek,S., and Orth,G; RT " Characterization of a new type of human papillomavirus (HPV) RT related to HPV5 from a case of actinic keratosis;" RL Virology 154(2), 389-394 (1986). XX XX Created by HIV database on 1-NOV-1995 from GenBank: U31785. XX XX XX FT KEY Location/Qualifiers FT CDS 200..673 FT /note="ORF E6 from bp 191 to 673" FT /product="transforming protein" FT /gene="E6" FT /note="putative" FT /codon_start=1 FT /translation="MAEQASEQQNITEKEKEQLPLTIKGLSESLGIPFVDCLIPCNFC FT GKFLDYLEACEFEVKKLSLIWKDYCVFACCRVCCGATATYEFNQFYQQTVLGRDIELA FT AGRSIFEIDIRCQTCLAFLDIIEKLDCCGRGLPFHRVRNAWKGICRQCKHFYNDW" FT CDS 663..971 FT /note="ORF E7 from bp 582 to 971" FT /product="transforming protein" FT /gene="E7" FT /note="putative" FT /codon_start=1 FT /translation="MIGKEVTVQDIVLELSEVQPEVLPVDLFCEEELPNEDTEEELDT FT ERIVFKVIAPCGCSHCEVKLRVFVQATEFGIRAFQQLLTGDLQLLCPECRGNCEHGGS FT " FT CDS 958..2772 FT /note="ORF E1 from bp 910 to 2772" FT /product="replication protein" FT /gene="E1" FT /note="putative" FT /codon_start=1 FT /translation="MADPKGSTSKEGFGDWCILEADCSDIENDMEQLFERDTDSDISD FT LIDDCDLEQGNSLELFHQQECKQSEEQLQKLKRKCLSPKAVAQLSPRLQSISLSPQQK FT SKRRLFAEQDSGVELTLNNEAEDVTTEVEVPAIDSRPDDEGGSGDVDIHYLSLLRSSN FT KKATLMAKFKAAFGVGFNELTRQFKSHKTCCNHWVVSVYAVHDDLFESSKQLLQQHCD FT YLWVRGIDAMSLYLLCFKAGKNRGTVHKLMTSMLNVHEQQILSEPPKLRNTAAALFWY FT KGCMGSGVFSYGPYPDWIAQQTILGHNNAEASTFDFSQMVQWAFDNQLVDEGDIAYRY FT ARLAPEDANAVAWLAHNSQAKFVRECAAMVRFYKKGQMRDMSMSEWIYTKIHEVEGEG FT HWSDIVKFLRYQEVNFIMFLAAFKDFLHSKPKKNCILIHGPPNSGKSSFAMSLIRVLK FT GRVLSFVNSKSQFWLQPLSECKIALIDDVTDPCWLYMDNYLRNGLDGHYVSLDCKYKA FT PMQTKFPPLLLTSNINVHEEANYRYLHSRIKGFAFPNPFPMKSDDTPQFELTDQSWKS FT FFERLWTQLELSDQEDEGENGESQRAFQCSAGSANEHL" FT CDS 2714..4243 FT /note="ORF E2 from bp 2684 to 4243" FT /product="regulatory protein" FT /gene="E2" FT /note="putative" FT /codon_start=1 FT /translation="MENLSERFNALQDLLMNIYEAAEQTLEAQIKHWQTLRQEAVLLY FT FARQRGVTRLGYQPVPVKAVSEAKAKEAIAMVLQLQSLQTSEYASETWTLVDTSIETF FT RSAPDGHFKKGPVPVEVIYDNDADNANLYTMWTYVYYMEDDVWHKARSGVNETGIYYL FT QGTFKYYYVLFADDARKYSQTGQWEVKVNKETVFAPVTSSTPPGSPGGQADTNASSKT FT STTTTATVDSTTKQLTTSEQPQQTETKGRKYGRRPSSRTRRPQAKQRRSRSRHRSSRS FT RSRSQSRSHTPTTRSATTRSRSPSLAKTGVQRVSTRSRSRSTSRRGGRRRRSRSPSTS FT SSTTTTNKRSRVRAETTGSRGARGGRGARGGSGGGRRRGRSSSSTSPAHKRSREHSVR FT SRGVSPDQVGKSLRSVSSKHTGRLGRLLEEALDPPVILVRGEANTLKCFRNRAKIKYM FT GLYRSFSTTWSWVAGDGTERLGRPRMLISFSSYNQRRDFDDVVRYPKGVEKSYGNLDS FT L" FT CDS <3273..3998 FT /note="ORF E4 from bp 3273 to 3998" FT /gene="E4" FT /note="putative" FT /codon_start=1 FT /translation="KLIRKLSLPLSPAPPLQGRQEDKQTQTPPPRPPPPPQPPLTPRP FT SSSPHQNSHNKPKPKEESTDGGPPAGQGDRKRSKGDQGPDTDPLGPDRGPSPGPTPQP FT LGLPPPGLGPRRSPRLGSSGYQPDHDPEAPLEGEVEGGGHGHHPPPPPPPPPTNGHEC FT GPKPQGPEGREGVEGPGVGAVGGGDEDDHPPPPPPPTNGQESTLLGAVACLLTKWESH FT FDLLVQNIQDDLEDYWKKLSIPQ" FT CDS 4321..5877 FT /note="ORF L2 from bp 4282 to 5877" FT /product="minor capsid protein" FT /gene="L2" FT /note="putative" FT /codon_start=1 FT /translation="MARAKRVKRDSVTHIYQTCKQAGTCPPDVVNKVEQTTVADNILK FT YGSAGVFFGGLGIGSGRGTGGATGYVPLSEGPGIRVGGTPTVVRPSLVPEAIGPVDIL FT PIDTIDPVEPTASSVVPLTESTGPDLLPGEVETIAEIHPVAEGPSVDTPVVTTSTGSS FT AVLEVAPEPIPPTRVRISRTQYHNPSFQIITESTPAQGESSLADHILVTSGSGGQRIG FT ADITDEIELQELPSRYTFENEEPTPPRRSSTPLQATRAAGRRRGVSLTNRRLVQQVPV FT ENPLFLTQPSRLVRFAFENPAFEEEVTNIFEHDVDAFEEPPDRDFLDVQRLGRPQYST FT TPAGYVRVSRLGTRATIRTRSGAQIGSQVHFYRDLSSINTEDPIELQLLGQHSGDASI FT VQGPVESTFIDVNVSENPLSESVEAFSDDLLLDEAVEDFSGSQLVIGNRRSTTSYTVP FT RFETTRSGSYYVQDSKGYYVAYPESRNNAEIIYPTPDIPVVVIHTHDNTGDFYLHPSL FT RWRKRKRKYL" FT CDS 5891..7441 FT /note="ORF L1 from bp 5798 to 7441" FT /product="major capsid protein" FT /gene="L1" FT /note="putative" FT /codon_start=1 FT /translation="MAVWHSANGKVYLPPSTPVARVQSTDEYIQRTNIYYHAFSDRLL FT TVGHPYFNVYDITGNKLEVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWS FT CRGLEIGRGQPLGVGSTGHPLFNKLKDTENSNSYIKSSKDDRQDTSFDPKQIQMFIVG FT CTPCIGEHWDKAIPCEKERQDNRLCPPIELKTTYIEDGDMADIGFGNLNFKNLQESRS FT DVSLDIVNETCKYPDFLKMQNDVYGDACFFYARREQCYARHFFVRGGKTGDDIPDARI FT DNGTFKNQFFIPGADGQDQKTIGNAMYYPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG FT ILWANQMFITVVDNTRNTNFSISIYNNNGALKDINDYTAEQFREYQRHVEEYEISLIL FT QLCKVPLKAEVLAQINAMNSSLLEDWQLGFVPTPDNPIQDTYRYIDSLATRCPDKTPP FT KEKEDPYKGLKFWDVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVSGTKSVSYRGFTR FT GTKRKRKQ" FT source 1..7722 FT /organism="Human papillomavirus type 36" XX SQ SEQUENCE 7722 bp; 2337 a; 1497 c; 1773 g; 2115 t; gtaagttatt taatttatgt accaggtgcg gtactggaat ttcacaataa taattgttgt 60 tgccaactac cattgctata ttcaagtttt tgcctgtatc gttttcgtat catgtgaata 120 atatactgta tagtataaat aaataaataa atatatatat atatgcttca aaggttgggt 180 tttttaataa ttaaggcaaa tggcagagca agcctccgaa cagcagaata ttacagaaaa 240 agaaaaagaa cagctgcctt taactattaa gggcctgtca gaatcattag gcattccgtt 300 tgtagactgt ctaatacctt gtaacttttg tggcaaattt ttagattatt tagaagcttg 360 tgagtttgag gttaaaaagc ttagtttaat ttggaaggat tactgtgtat ttgcctgctg 420 tcgtgtttgt tgtggtgcaa cagccacata tgagtttaat cagttttatc agcagacagt 480 attaggaaga gatattgaat tggctgcagg tcgctccata tttgaaattg acattaggtg 540 tcagacgtgc ttagcttttc ttgacataat tgagaagtta gattgttgtg gaagaggact 600 tccctttcat agagtcagaa acgcctggaa gggaatctgt aggcagtgta agcattttta 660 taatgattgg taaagaggtc accgtgcaag atattgttct ggagctcagt gaggtgcagc 720 ctgaagtact accagttgac ctgttttgtg aagaggaatt accaaacgag gatacggagg 780 aggagcttga caccgaaaga atcgttttca aagtcattgc accgtgtggt tgcagccact 840 gtgaggtcaa gctccgcgtt tttgtccaag ctacagaatt tggcatcaga gcatttcaac 900 agttgctgac cggtgacctg cagcttctgt gtcccgagtg tcgtgggaac tgcgaacatg 960 gcggatccta aaggtagtac atctaaagaa gggtttggtg attggtgtat tttggaagct 1020 gactgtagtg atatagaaaa tgatatggaa caattatttg aaagagatac agattctgat 1080 atttcggact taatagatga ttgtgacctg gaacagggaa attctttgga actatttcac 1140 caacaggagt gtaagcagag cgaggagcaa ttacaaaaac taaaacgaaa gtgtcttagt 1200 ccaaaagctg tcgcacagct tagtccgcga cttcagtcaa tttcattgtc acctcagcag 1260 aagtctaagc gaaggctctt tgcagagcag gacagcggag tcgagctgac cttaaacaat 1320 gaagctgaag atgttactac tgaggtggag gtaccggcta tagactctcg gccggatgac 1380 gagggaggat caggggatgt agatatacat tatctttcac tgttgcgttc cagcaacaaa 1440 aaagccacat taatggcaaa atttaaagca gcgtttgggg taggctttaa tgaattgaca 1500 cgtcaattca aaagtcacaa aacctgctgt aatcattggg ttgtctctgt ttatgcagtc 1560 catgatgatc tatttgaaag ttcaaagcag ttgttgcaac agcattgtga ctatttatgg 1620 gttcgtggga tagatgcaat gtcattatat ctattgtgtt ttaaggcggg aaaaaatcgc 1680 gggacagtgc ataagttgat gacttcaatg ttaaatgtgc atgaacagca gattttgtct 1740 gagcctccaa agttaagaaa tactgctgct gcattgtttt ggtacaaagg ctgtatggga 1800 tcgggggtgt tcagttatgg gccatatcct gattggattg cacaacagac tatattaggt 1860 cacaataatg ctgaagcaag cacctttgat ttttcacaga tggtacaatg ggcctttgat 1920 aatcagttag ttgatgaagg agatattgca tatcgatatg caaggcttgc accagaagat 1980 gccaatgctg ttgcatggct tgcacataat agtcaagcta aatttgtaag agagtgtgca 2040 gcaatggtgc gcttttataa aaaaggtcaa atgagggata tgtccatgtc ggaatggatc 2100 tatactaaaa tacatgaggt agaaggtgaa ggtcactggt cagatatagt aaaattttta 2160 agatatcagg aggtaaactt tataatgttt ttggctgcat tcaaagattt tttgcactca 2220 aagccaaaaa aaaattgtat tttaattcat ggccctccta attcaggaaa gtcatcattt 2280 gcaatgtcat taataagggt attaaaaggc agagtattat cttttgtaaa ttcaaaaagc 2340 caattttggt tgcaacccct ttctgaatgt aaaatagcat tgattgatga tgtaactgac 2400 ccctgttggt tatatatgga taattatcta agaaacggtt tagatgggca ttatgtctca 2460 ttggattgta aatacaaagc tccaatgcaa acaaagtttc ctccattatt actaacatct 2520 aatataaatg tgcatgagga agctaattac agatacttac acagtagaat taaaggattt 2580 gcatttccaa atccattccc aatgaaatca gacgatacac ctcagtttga gttaactgac 2640 caaagctgga aatctttttt tgaaaggctt tggacacaat tagaactcag tgaccaagaa 2700 gacgagggcg aaaatggaga atctcagcga gcgtttcaat gctctgcagg atctgctaat 2760 gaacatttat gaagctgcag aacagacact tgaggcacag ataaaacact ggcaaacctt 2820 gcgacaagaa gctgttttgc tctactttgc taggcagaga ggtgtgacaa ggcttggata 2880 tcaacctgtg cctgtaaaag ctgtatctga agcaaaagct aaagaggcta tagcaatggt 2940 gctgcagctt cagtctctac aaacgtctga atatgcatct gaaacttgga cattagttga 3000 caccagtata gaaactttta gaagcgctcc agacggtcac tttaaaaagg gtccagtgcc 3060 tgtagaagtg atttatgaca atgatgcaga taatgccaat ttgtacacta tgtggacata 3120 cgtgtattat atggaagacg atgtgtggca taaagccaga agtggggtca atgagactgg 3180 catatattat ttacaaggaa catttaaata ttactatgta ctatttgctg acgatgcacg 3240 taaatatagt caaactggac aatgggaagt gaaagttaat aaggaaactg tctttgcccc 3300 tgtcaccagc tccacccctc cagggtcgcc aggaggacaa gcagacacaa acgcctcctc 3360 caagacctcc accaccacca cagccaccgt tgactccacg accaagcagc tcaccacatc 3420 agaacagcca caacaaaccg aaaccaaagg aagaaagtac ggacggaggc cctccagcag 3480 gacaaggaga ccgcaagcga agcaaaggcg atcaaggtcc agacaccgat cctctaggtc 3540 ccgatcgcgg tcccagtccc ggtcccacac cccaaccact cggtctgcca ccacccggtc 3600 taggtccccg tcgctcgcca agactggggt ccagcgggta tcaaccagat cacgatccag 3660 aagcacctct agaaggggag gtagaaggcg gaggtcacgg tcaccatcca cctcctcctc 3720 caccaccacc accaacaaac ggtcacgagt gcgggccgaa accacagggt ccagaggggc 3780 gcgagggggt agaggggcca ggggtgggag cggtgggggg cggcgacgag gacgatcatc 3840 ctcctccacc tcccccgccc acaaacggtc aagagagcac tctgttagga gccgtggcgt 3900 gtctcctgac caagtgggaa agtcacttcg atctgttagt tcaaaacata caggacgact 3960 tggaagatta ctggaagaag ctctcgatcc cccagtgatc cttgttagag gggaggcaaa 4020 tacactaaaa tgctttcgca acagagctaa gataaaatac atgggactgt ataggtcatt 4080 tagtacaact tggtcatggg tggcaggaga tggcactgag cgtctaggca ggcccagaat 4140 gctcattagc ttttcgtcct acaatcagag aagggatttt gatgacgtgg tgagataccc 4200 gaaaggagtt gaaaaatcat atggcaacct tgacagtctc taaccactaa tgctatgctg 4260 ctttgctact aacaacacta acaaattagc tttttatact tttttacttt tgtacctgca 4320 atggcgcgtg ctaaaagggt caagcgagac tctgtaacac atatatacca gacctgcaaa 4380 caagcaggca catgcccccc tgatgttgtg aataaagtgg aacaaacaac agttgctgac 4440 aatattttga aatatggcag tgctggtgtc ttttttggtg gccttggcat tggttcgggc 4500 cgaggtactg ggggtgctac cgggtacgtg ccacttagtg aaggtcctgg tatccgtgtc 4560 ggaggtaccc ccacggttgt aaggccttca ttagttcctg aagcaattgg gccagtcgat 4620 attttgccca ttgatacaat tgatcctgtg gagcctacag catcgtccgt ggttcctctt 4680 actgaatcca ctggacctga tttacttcca ggtgaggtgg aaacaatagc tgaaattcat 4740 cctgttgctg aaggcccatc agttgatacc cctgtggtta ccacaagcac gggttccagt 4800 gctgttttgg aagttgctcc agagcctata cctccaacac gggttagaat ctcacgtaca 4860 caatatcaca atccttcctt tcaaattatt acagaatcaa cacctgcaca gggtgaaagc 4920 tctcttgcag atcacatttt agtgacatca gggtccgggg gacaaagaat aggggctgat 4980 attactgatg aaattgaact tcaagaactt cctagtagat atacttttga aaatgaagaa 5040 ccaactccac ctagacgtag cagcacacct ttacaggcca cacgagctgc aggtagacgg 5100 agaggtgttt ctttaactaa tagacgtcta gtacagcagg tacctgtaga aaatcctttg 5160 tttttaactc aaccctctcg attggtgcgt tttgcttttg aaaatcctgc atttgaagaa 5220 gaagttacaa atatatttga acatgatgta gatgcttttg aagaaccacc agatagggat 5280 tttcttgatg tccaacggtt gggtcgtccc caatattcta caactcctgc agggtatgtg 5340 agggttagta gattaggtac tcgtgcaacc attcgcacgc ggtctggtgc acaaataggg 5400 tcacaggtgc acttttatag ggatctcagt tccattaata ctgaagatcc tatagaattg 5460 cagttgttgg ggcaacattc gggggatgct agtatagttc aaggccctgt ggaaagcaca 5520 tttatagacg taaatgtgtc tgaaaatcct ttgtctgaaa gtgtggaagc cttttctgat 5580 gatttattgc tggatgaagc tgtggaggat tttagtgggt cacaattagt tattggtaat 5640 agaagaagta ccacttctta cactgttccc agatttgaaa ctactaggag tggttcttat 5700 tatgtccagg acagtaaagg atattatgtt gcatacccag aatctcgcaa taatgcagaa 5760 ataatttatc ctacacctga tatacctgta gtggtaatac acactcatga caatacaggt 5820 gacttttatt tacatcctag tcttcgatgg cgcaaacgta aaagaaaata tttgtgattt 5880 tgcattgcag atggcagtgt ggcattcggc taatggtaaa gtataccttc ctccatcgac 5940 accggttgcc agggtgcaaa gcacggatga atatatacaa aggacaaata tttattatca 6000 tgcattcagc gacagactac tgactgtagg ccatccatac ttcaatgttt acgatattac 6060 tggtaacaaa ttagaagtcc ctaaagtgtc tggtaaccaa cacagggttt ttcgcttgaa 6120 attacctgat cctaatagat ttgcattagc tgacatgtca gtttataacc cagataaaga 6180 acggttggtg tggagctgta ggggccttga aataggtaga ggacaaccgt taggtgttgg 6240 cagtacggga cacccactat ttaataagtt gaaagacact gaaaacagta attcatatat 6300 aaaatcttct aaagatgata gacaggatac atcatttgat cccaaacaaa ttcaaatgtt 6360 tatcgtggga tgcacacctt gtataggtga acattgggac aaggctatac cttgtgaaaa 6420 ggagcgccag gacaacagac tatgcccacc aattgaattg aaaactactt atatagaaga 6480 tggcgacatg gcagatatag gttttggaaa tttaaacttc aaaaatctgc aagagagtag 6540 gtcagatgta agtttggata tagttaatga aacctgcaaa tatcctgact tcttaaaaat 6600 gcagaatgat gtttatggag atgcctgttt tttttatgct cgcagagagc aatgttatgc 6660 cagacatttt tttgtccgtg gaggtaaaac gggtgacgac atccctgacg ccagaattga 6720 taatgggact tttaagaatc agtttttcat tcctggggct gacggccaag atcaaaagac 6780 cataggaaat gccatgtatt acccaactgt tagtggctca ttggtgtcta gtgatgctca 6840 attgtttaac aggcccttct ggctccagcg agcacaaggt cataataatg gcattctgtg 6900 ggctaatcag atgtttatta cagtggtaga caacacacga aatactaact ttagtatttc 6960 aatatataac aataatgggg cactaaagga catcaatgat tacactgcag agcaatttag 7020 agaatatcaa aggcacgtgg aggaatatga aatttcatta atattacagc tatgtaaggt 7080 tcctctgaag gcagaagtat tggctcagat aaatgctatg aattcttctt tattggaaga 7140 ttggcagtta ggttttgtac ctactccaga taaccctatt caagacacct atcgatatat 7200 tgattcatta gccactcgct gtcctgataa aaccccccct aaggaaaaag aggatcccta 7260 caaggggtta aagttctggg atgtggatct tactgaacgg ttgtcactag atttggatca 7320 atactcttta ggtagaaagt ttctatttca agccggctta cagcagacga ccgtaagcgg 7380 tacaaaatca gtgtcttatc gagggttcac cagaggaacc aagcgcaagc gaaaacagta 7440 atatgaccgt ttttggtaca gatttataaa cttttacaca gtattcaagg aatgtttgtt 7500 tactctgact aagtataact ctaccaaggg aaccgaccgc acccggtaca gtcaacgata 7560 ctgctgccaa tatagactct gtttagtgcc agaacatatc atcttggaag cagatcgacc 7620 gtgttcgttg taacacgctc ggattagaga cattgccaag gaagatttaa tctacaatcg 7680 ctgttggcaa tcgcttttgg ctgagatagc tgaccggtaa cg 7722