ID HPV35h STANDARD; ds-DNA; VRL; 7879 bp. XX DE Human papillomavirus type 35h (HPV-35h), complete genome. XX AC X74477 XX DT 04-OCT-1993 XX OS Human papillomavirus type 35h DNA. OC Human papillomavirus type 35h;Viridae; ds-DNA nonenveloped viruses; OC Papovaviridae;Papillomavirus. XX RN [1] RP 1 - 7879 RA Delius,H. and Hofmann,B; RT "Primer-directed sequencing of human papillomavirus types;" RL Curr. Top. Microbiol. Immunol. 186, 13-31 (1994)full staff_review. XX RN [2] RP 1 - 7879 RA Delius,H; RT "Direct Submission;" RL Submitted (06-AUG-1993) to the EMBL/GenBank/DDBJ databases. H.Delius, RL Deutsches Krebsforschungszentrum, Abteilung ATV, ImNeuenheimer Feld RL 506, W 6900 Heidelberg, FRGfull staff_review. XX XX Created by HIV database on 1-NOV-1995 from GenBank: X74477. XX XX HPV-35h is considered to be a member of the "intermediate risk" XX FT KEY Location/Qualifiers FT CDS 110..559 FT /note="putative" FT /note="ORF E6 from bp 59 to 559" FT /product="transforming protein" FT /gene="E6" FT /note="putative" FT /codon_start=1 FT /translation="MFQDPAERPYKLHDLCNEVEESIHEICLNCVYCKQELQRSEVYD FT FACYDLCIVYREGQPYGVCMKCLKFYSKISEYRWYRYSVYGETLEKQCNKQLCHLLIR FT CITCQKPLCPVEKQRHLEEKKRFHNIGGRWTGRCMSCWKPTRRETEV" FT CDS 562..861 FT /note="putative" FT /note="ORF E7 from bp 544 to 861" FT /product="transforming protein" FT /gene="E7" FT /note="putative" FT /codon_start=1 FT /translation="MHGEITTLQDYVLDLEPEATDLYCYEQLCDSSEEEEDTIDGPAG FT QAKPDTSNYNIVTSCCKCEATLRLCVQSTHIDIRKLEDLLMGTFGIVCPGCSQRA" FT CDS 868..2781 FT /note="putative" FT /note="ORF E1 from bp 862 to 2781" FT /product="replication protein" FT /gene="E1" FT /note="putative" FT /codon_start=1 FT /translation="MADPAGTDEGEGTGCNGWFFVEAVVSRRTGDPVSEDENEDDCDR FT GEDMVDFINDTDILNIQAETETAQALFHAQEEQTHKEAVQVLKRKYASSPLSSVSLCV FT NNNISPRLKAICIENKNTAAKRRLFELPDSGYGNSEVEIQQIQQVEGHDTVEQCSMGS FT GDSITSSSDERHDETPTRDIIQILKCSNANAAMLAKFKELFGISFTELIRPFKSDKST FT CTDWCVAAFGIAPSVAESLKTLIKPYCLYIHIQCLSCSWGMVILALLRFKCAKNRTTI FT EKLLSKLLCISAASMLIQPPKLRSTPAALYWFKTAMSNISEVDGETPEWIQRQTVLQH FT SFNDAIFDLSEMVQWAYDNDFIDDSDIAYKYAQLAETNSNACAFLKSNSQAKIVKDCA FT TMCRHYKRAEKREMTMSQWIKRRCEKVDDDGDWRDIVRFLRYQQVDFVAFLSALKNFL FT HGVPKKNCILIYGAPNTGKSLFGMSLMHFLQGAIISYVNSKSHFWLQPLYDAKIAMLD FT DATSPCWAYIDQYLRNALDGNPISLDVKHKALVQLKCPPLLITSNINAGKDDRWPYLH FT SRVVVFTFHNEFPFDKNGNPVYGLNDKNWKSFFSRTWCRLNLHEEEDKENDGDAFPAF FT KCVSGQNTRTLRD" FT CDS 2714..3817 FT /note="putative" FT /note="ORF E2 from bp 2687 to 3817" FT /product="regulatory protein" FT /gene="E2" FT /note="putative" FT /codon_start=1 FT /translation="MMETLSQRLSVCQDKILEHYETDSTCLSDHIQYWKLIRLECAVF FT YKAREMGIKTLNHQVVPTQAISKAKAMQAIELQLMLETLNTTEYSTETWTLQETSIEL FT YTTVPQGCFKKHGVTVEVQFDGDKQNTMHYTNWTHIYILEDSICTVVKGLVNYKGIYY FT VHQGVETYYVTFREEAKKYGKKNIWEVHVGGQVIVCPESVFSSTELSTAEIATQLHAY FT NTTETHTKACSVGTTETQKTNHKRLRGGTELPYNPTKRVRLSAVDSVDRGVYSTSDCT FT NKDRCGSCSTTTPIVHLKGDANTLKCLRYRLGKYKALYQDASSTWRWTCTNDKKQIAI FT VTLTYTTEYQRDKFLTTVKIPNTVTVSKGYMSI" FT TATA_signal 2846..2851 FT /note="putative" FT CDS <3294..3584 FT /note="putative" FT /gene="E4" FT /note="putative" FT /codon_start=1 FT /translation="LFVLNLYLAAQNYPLLKLLHSYTPTTPPRPIPKPAPWAPQKPRR FT QITNDFEGVPSSPTTPPSECDSVPWTVLTEGSTLHLTAQTKTGVVVVVQLHL" FT CDS 3814..4065 FT /note="putative" FT /note="ORF E5 from bp 3799 to 4065" FT /gene="E5" FT /note="putative" FT /codon_start=1 FT /translation="MIDLTASSTVLLCFLLCFCVLLCLCLLVRSLLLSVSLYSALILL FT VLILWVTVATPLRCFCCFLCFLYIPMGMINAHAQYLAVQ" FT CDS 4211..5620 FT /note="putative" FT /note="ORF L2 from bp 4196 to 5620" FT /product="minor capsid protein" FT /gene="L2" FT /note="putative" FT /codon_start=1 FT /translation="MRHKRSTKRVKRASATQLYRTCKAAGTCPPDVIPKVEGNTVADQ FT ILKYGSMAVFFGGLGIGSGSGTGGRSGYVPLGTTPPTAATNIPIRPPVTVESIPLDTI FT GPLDSSIVSLVEETSFIESGAPVVTPRVPPTTGFTITTSTDTTPAILDVTSISTHDNP FT TFTDPSVLHPPTPAETSGHFVLSSSSISTHNYEEIPMDTFIVSTDSNNITNSTPIPGS FT RPTTRLGLYSKGTQQVKVVDPAFMTSPAKLITYDNPAYEGLNPDTTLQFEHEDISLAP FT DPDFMDIIALHRPALTSRKGTIRYSRVGNKRTMHTRSGKAIGARVHYYQDLSSITEDI FT ELQPLQHVPSSLPHTTVSTSLNDGMFDIYAPIDTEEDIIFSASSNNTLYTTSNTAYVP FT SNTTIPLSSGYDIPITAGPDIVFNSNTITNTVLPVPTGPIYSIIADGGDFYLHPSYYL FT LKRRRKRIPYFFADVSVAV" FT CDS 5601..7109 FT /note="putative" FT /note="ORF L1 from bp 5565 to 7109" FT /product="major capsid protein" FT /gene="L1" FT /note="putative" FT /codon_start=1 FT /translation="MSLWRSNEATVYLPPVSVSKVVSTDEYVTRTNIYYHAGSSRLLA FT VGHPYYAIKKQDSNKIAVPKVSGLQYRVFRVKLPDPNKFGFPDTSFYDPASQRLVWAC FT TGVEVGRGQPLGVGISGHPLLNKLDDTENSNKYVGNSGTDNRECISMDYKQTQLCLIG FT CRPPIGEHWGKGTPCNANQVKAGECPPLELLNTVLQDGDMVDTGFGAMDFTTLQANKS FT DVPLDICSSICKYPDYLKMVSEPYGDMLFFYLRREQMFVRHLFNRAGTVGETVPADLY FT IKGTTGTLPSTSYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNGICWSNQLFVTVVDT FT TRSTNMSVCSAVSSSDSTYKNDNFKEYLRHGEEYDLQFIFQLCKITLTADVMTYIHSM FT NPSILEDWNFGLTPPPSGTLEDTYRYVTSQAVTCQKPSAPKPKDDPLKNYTFWEVDLK FT EKFSADLDQFPLGRKFLLQAGLKARPNFRLGKRAAPASTSKKSSTKRRKVKS" FT TATA_signal 6657..6663 FT /note="putative" FT source 1..7879 FT /organism="Human papillomavirus type 35h" FT /clone="insert in BamHI site of pBR322" FT /sequenced_mol="DNA" XX SQ SEQUENCE 7879 bp; 2570 a; 1339 c; 1570 g; 2400 t; ccctataaaa aaaacaggga gtgaccgaaa acggtcgtac cgaaaacggt tgccataaaa 60 gcagaagtgc acaaaaaagc agaagtggac agacattgta aggtgcggta tgtttcagga 120 cccagctgaa cgaccttaca aactgcatga tttgtgcaac gaggtagaag aaagcatcca 180 tgaaatttgt ttgaattgtg tatactgcaa acaagaatta cagcggagtg aggtatatga 240 ctttgcatgc tatgatttgt gtatagtata tagagaaggc cagccatatg gagtatgcat 300 gaaatgttta aaattttatt caaaaataag tgaatataga tggtatagat atagtgtgta 360 tggagaaacg ttagaaaaac aatgcaacaa acagttatgt catttattaa ttaggtgtat 420 tacatgtcaa aaaccgctgt gtccagttga aaagcaaaga catttagaag aaaaaaaacg 480 attccataac atcggtggac ggtggacagg tcggtgtatg tcctgttgga aaccaacacg 540 tagagaaacc gaggtgtaat catgcatgga gaaataacta cattgcaaga ctatgtttta 600 gatttggaac ccgaggcaac tgacctatac tgttatgagc aattgtgtga cagctcagag 660 gaggaggaag atactattga cggtccagct ggacaagcaa aaccagacac ctccaattat 720 aatattgtaa cgtcctgttg taaatgtgag gcgacactac gtctgtgtgt acagagcaca 780 cacattgaca tacgtaaatt ggaagattta ttaatgggca catttggaat agtgtgcccc 840 ggctgttcac agagagcata atctacaatg gctgatcctg caggtacaga tgaaggggag 900 gggacgggat gtaatggatg gttttttgta gaagcagtag ttagtagacg tacgggggat 960 ccagtgtcag aggacgaaaa tgaagatgac tgtgacaggg gggaggatat ggtggacttt 1020 ataaatgata cagatatatt aaacatacag gcagaaacag agacagcaca agcattattt 1080 catgcacagg aggagcaaac acacaaagag gctgtacagg tcctaaaacg aaagtatgct 1140 agtagtccac ttagcagcgt gagcttatgt gttaataata acataagtcc acgtttaaaa 1200 gctatttgca ttgaaaataa aaatacagca gcaaagcgac gattatttga actaccagac 1260 agcggttatg gcaattctga agtggaaata cagcagatac aacaggtaga ggggcatgat 1320 acagttgaac aatgtagtat gggcagtggg gatagtataa cctctagtag cgatgaaaga 1380 catgatgaga ctccaacgcg agacataata caaatactaa aatgtagtaa tgcaaacgca 1440 gctatgttgg ctaaatttaa agaactattt ggtattagtt ttacagaact tattagacca 1500 tttaagagtg ataaatccac atgtacagat tggtgtgtgg ccgcatttgg aatagcccca 1560 agtgtggcgg aaagtttaaa aacattaatt aaaccatatt gtttatatat acatatacaa 1620 tgtttatcgt gttcatgggg tatggtaatt ctagcattat tacgatttaa atgtgcaaaa 1680 aacagaacaa caattgaaaa actattatca aaattgctat gtatttcagc tgcaagtatg 1740 ctaatacaac caccaaaatt acgtagtacc ccagctgcgt tatattggtt taaaacagca 1800 atgtcaaata ttagtgaggt tgatggagaa acaccagaat ggattcaaag acaaacagta 1860 ttacagcata gttttaatga tgcaatattt gacctatctg aaatggtaca atgggcatat 1920 gacaatgatt ttatagatga tagtgatata gcatataaat atgcacaatt ggcagaaact 1980 aatagtaatg catgtgcttt tttaaaaagt aattcgcaag ctaaaattgt aaaagattgt 2040 gcaacaatgt gtagacatta taaacgagct gaaaaaagag aaatgacaat gtcacagtgg 2100 attaaaaggc gatgtgaaaa ggtggacgat gacggtgact ggagggacat agtacgattt 2160 ttaagatatc aacaagtaga ttttgtggca tttttatctg cactaaaaaa ttttttacat 2220 ggtgtgccta aaaaaaattg catacttata tatggagcac caaacacagg taaatcatta 2280 tttggaatga gtctaatgca tttcttacaa ggagctatta tatcctatgt aaattctaaa 2340 agccattttt ggttgcagcc attatatgat gccaaaatag ctatgttaga tgatgctaca 2400 tcgccatgtt gggcatatat agaccaatat ttaagaaatg cactagatgg aaatcctatt 2460 tcattagatg taaagcataa agcattagtg caattaaaat gcccaccttt acttattaca 2520 tcaaatataa atgcaggcaa agatgacagg tggccatact tacatagcag ggtagtggtc 2580 tttacatttc acaatgaatt cccatttgat aaaaatggaa acccagtgta tgggcttaat 2640 gataaaaact ggaaatcctt tttctcaagg acgtggtgca gattaaattt gcacgaggaa 2700 gaggacaaag aaaatgatgg agacgctttc ccagcgttta agtgtgtgtc aggacaaaat 2760 actagaacat tacgagactg atagcacatg tttgtctgat cacatacagt attggaaact 2820 gattcgtctt gaatgtgcag tattttataa agcaagagaa atgggaatta aaactcttaa 2880 ccaccaagtg gttccaacgc aggccatttc aaaagccaaa gcaatgcaag caattgaact 2940 gcaattaatg ttagagacat taaatacaac tgagtatagc acagaaacat ggacactgca 3000 agaaacaagt attgaattat atacaacagt tccacaagga tgttttaaaa aacatggggt 3060 tacagtggaa gtacaatttg atggtgataa acaaaatact atgcattata ctaattggac 3120 acatatatat atattagagg acagtatatg tactgttgta aagggactgg taaattataa 3180 aggtatttat tatgtgcatc agggtgtaga aacatattat gttactttta gggaagaggc 3240 taaaaagtat ggaaaaaaaa atatatggga agtgcatgtg ggtggtcagg taattgtttg 3300 tcctgaatct gtatttagca gcacagaact atccactgct gaaattgcta cacagctaca 3360 cgcctacaac accaccgaga cccataccaa agcctgctcc gtgggcacca cagaaaccca 3420 gaagacaaat cacaaacgac ttcgaggggg taccgagctc ccctacaacc ccaccaagcg 3480 agtgcgactc agtgccgtgg acagtgttga cagaggggtc tactctacat ctgactgcac 3540 aaacaaagac cggtgtggta gttgtagtac aactacacct atagtacatt taaaaggtga 3600 tgcaaataca ttaaagtgtt taagatatag attgggtaaa tataaagcat tgtatcaaga 3660 tgcttcatct acatggagat ggacatgtac aaacgataaa aaacaaatag caattgtaac 3720 attaacttac acaacagaat atcaaaggga taaattttta actacagtaa aaatacctaa 3780 cacagttaca gtgtctaaag gatatatgtc tatatgatag accttacagc ttccagtact 3840 gtgttgctgt gctttttgtt gtgcttttgt gtgcttttgt gcttgtgtct gcttgtacgt 3900 tcgctattgc tatctgtgtc attatactca gcattaatat tactggtttt aatactgtgg 3960 gttactgtag caacaccact acgttgcttt tgttgttttc tttgcttttt gtatatacct 4020 atgggaatga ttaacgctca tgcacaatat ttggcagtac agtaattgta tacaaacatt 4080 gtgtttggta ctgtgtaaca tgtgtgtatg gtggttttat tttttgttgt tcattgtata 4140 ttttgttttt ttactgtttt taaacatttt tatttctgtg tttttaataa attgatcaca 4200 tggtataacc atgcgacaca aaaggtctac aaaacgtgtt aaacgtgcat ctgcaacaca 4260 actatatcgt acttgcaaag ctgcaggaac ttgtccacca gatgttatac ctaaggttga 4320 gggtaatact gttgctgatc aaattttaaa atatggcagc atggctgtgt tttttggggg 4380 gttaggaatt ggttctggat ctggcacagg tggaagatct ggatatgttc cactgggtac 4440 aacacctcca acggctgcca caaacattcc tatacgaccc cctgtaactg tggaaagtat 4500 accattagac acaattggcc ctttagattc ttctatagtg tcattagtag aggaaactag 4560 ttttattgag tctggtgccc ctgttgttac accaagggtc ccacctacaa caggttttac 4620 aataaccaca tctacagata ccacacctgc tattttagat gtgacatcca taagtacaca 4680 tgataatcct actttcactg atccttctgt tttacaccca cccacgcctg cagaaacttc 4740 aggtcatttt gtactttcat catcttctat tagtacacat aattatgaag aaatccctat 4800 ggatactttt attgtttcca cagacagcaa taatataact aatagcacgc ctattccagg 4860 gtctcgccct acgacacgcc taggattata tagtaaaggt acccagcagg ttaaggttgt 4920 tgaccctgcc tttatgactt ctcctgcaaa acttattaca tatgataatc ctgcatatga 4980 aggccttaac cctgatacaa ccttacaatt tgagcatgag gatattagct tagctccgga 5040 tcctgacttt atggacatta tagctttaca taggcctgca ctaacatcta ggaaaggcac 5100 tattagatat agtagagtag gtaataaacg tactatgcat acacgaagtg gaaaagctat 5160 aggggcacgg gtacattatt atcaggattt aagtagtatt actgaagata tagaattaca 5220 acccttacaa catgtaccat cctctttacc acataccact gtttcaacat cattaaatga 5280 tggtatgttt gatatttatg ctcctataga tactgaggaa gatattatat tttcagcatc 5340 ttctaacaat actttatata ctacatctaa cactgcatat gttcctagca atactactat 5400 accattaagt agtggctatg atattcctat aacagcaggg ccagacattg tatttaactc 5460 taatactatt actaacactg tactaccggt acccacaggt cctatatatt ctattattgc 5520 agatgggggt gacttttatt tacaccctag ttattattta ttaaaacgac gtcgtaaacg 5580 tatcccatat ttttttgcag atgtctctgt ggcggtctaa cgaagccact gtctacctgc 5640 ctccagtgtc agtgtctaag gttgttagca ctgatgaata tgtaacacgc acaaacatct 5700 actatcatgc aggcagttct aggctattag ctgtgggtca cccatactat gctattaaaa 5760 aacaagattc taataaaata gcagtaccca aggtatctgg tttgcaatac agagtattta 5820 gagtaaaatt accagatcct aataagtttg gatttccaga cacatcattt tatgatcctg 5880 cctcccagcg tttggtttgg gcctgtacag gagttgaagt aggtcgtggt cagccattgg 5940 gtgtaggtat tagtggtcat cctttattaa ataaattgga tgatactgaa aattctaata 6000 aatatgttgg taactctggt acagataaca gggaatgcat ttctatggat tataaacaaa 6060 cacaattgtg tttaataggt tgtaggcctc ctataggtga acattgggga aaaggcacac 6120 cttgtaatgc taaccaggta aaagcaggag aatgtcctcc tttggagtta ctaaacactg 6180 tactacaaga cggggacatg gtagacacag gatttggtgc aatggatttt actacattac 6240 aagctaataa aagtgatgtt cccctagata tatgcagttc catttgcaaa tatcctgatt 6300 atctaaaaat ggtttctgag ccatatggag atatgttatt tttttattta cgtagggagc 6360 aaatgtttgt tagacattta tttaataggg ctggaactgt aggtgaaaca gtacctgcag 6420 acctatatat taagggtacc actggcacat tgcctagtac tagttatttt cctactccta 6480 gtggctctat ggtaacctcc gatgcacaaa tatttaataa accatattgg ttgcaacgtg 6540 cacaaggcca taataatggt atttgttgga gtaaccaatt gtttgttact gtagttgata 6600 caacccgtag tacaaatatg tctgtgtgtt ctgctgtgtc ttctagtgac agtacatata 6660 aaaatgacaa ttttaaggaa tatttaaggc atggtgaaga atatgattta cagtttattt 6720 ttcagttatg taaaataaca ctaacagcag atgttatgac atatattcat agtatgaacc 6780 cgtccatttt agaggattgg aattttggcc ttacaccacc gccttctggt accttagagg 6840 acacatatcg ctatgtaaca tcacaggctg taacttgtca aaaacccagt gcaccaaaac 6900 ctaaagatga tccattaaaa aattatactt tttgggaggt tgatttaaag gaaaagtttt 6960 ctgcagactt agatcaattt ccgttgggcc gtaaattttt gttacaagca ggactaaagg 7020 ccaggcctaa ttttagatta ggcaagcgtg cagctccagc atctacatct aaaaaatctt 7080 ctactaaacg tagaaaagta aaaagttaat gtgtaaatgt gtatgcatgt atactgtgtg 7140 ttatgtgttg tagtgcttgt atatatatta tgtgttgtgg tgcctgtttg tgttgtacat 7200 ggcgtgtaaa tgtgtgtata atattgtgca atgtgttgta cgtgggtgtt ttttgtatgt 7260 atgttgttgt atgtatgtca gtacgcaata aaagtgatgt gtgtgtttat aattaacact 7320 gtattgttgt atgactatgg gtgcacccat atgacttaca taattacagt acacgctata 7380 tgttgtatat aacaattcta cctccatttt gtgtgttagt gtcctttaca ttacctttca 7440 accgatttcg gttgctgttg gcaagcttta tatgtttttt acaaaaacat tcctacctca 7500 gcagaacact taatccttgt gttcctgata tatattgttt gccaacttta tattggcttt 7560 tgccaatctt taaacttgat tcatcttgca gtattagtca tttttcatac ttgtggtcca 7620 cccacacttg taacacttgt aacagtgctt ttaggcacat attttttgca tttctaaagg 7680 gctttaattg cacacttggc tttacatatt atgtgtgttt gccaacacca ccctacacat 7740 cctgccaact ttaagttaaa acatgcatgt aaaacattac tcactgtatt acacattgtt 7800 atatgcacac aggtgtgtcc aaccgatttg gattacagtt ttataagcat ttctttttat 7860 tatagttagt aacaattat 7879