ID HPV2a STANDARD; ds-DNA; VRL; 7860 bp. XX DE Human papillomavirus type 2a (HPV-2a), complete genome. XX AC X55964 XX DT 21-JUN-1991 XX OS Human papillomavirus type 2a DNA. OC Human papillomavirus type 2a OC Viridae; ds-DNA nonenveloped viruses; Papovaviridae; OC Papillomavirus. XX RN [1] RP 1-7860 RA Delius,H.; RL Unpublished (1990). RN [2] RP (sites) RA Hirsch-Behnam,A., Delius,H. and De Villiers,E.M.; RT "A comparative sequence analysis of two human papillomavirus (HPV) RT types 2a and 57"; RL Virus Res. 18, 81-98 (1990). XX XX From EMBL 27 entry PAHPV2A; dated 18-FEB-1991. XX XX FT KEY Location/Qualifiers FT CDS 89..568 FT /note="putative" FT /note="ORF E6 from bp 5 to 568" FT /product="transforming protein" FT /gene="E6" FT /note="putative" FT /codon_start=1 FT CDS 529..807 FT /note="putative" FT /note="ORF E7 from bp 427 to 807" FT /product="transforming protein" FT /gene="E7" FT /note="putative" FT /codon_start=1 FT CDS 812..2743 FT /note="putative" FT /note="ORF E1 from bp 788 to 2743" FT /product="replication protein" FT /gene="E1" FT /note="putative" FT /codon_start=1 FT CDS 2685..3860 FT /note="putative" FT /note="ORF E2 from bp 2661 to 3860" FT /product="regulatory protein" FT /gene="E2" FT /note="putative" FT /codon_start=1 FT CDS 3223..3621 FT /note="putative" FT /note="ORF E4 from bp 3220 to 3621" FT /gene="E4" FT /note="putative" FT /codon_start=1 FT CDS 4235..5809 FT /note="putative" FT /note="ORF L2 from bp 4229 to 5809" FT /product="minor capsid protein" FT /gene="L2" FT /note="putative" FT /codon_start=1 FT CDS 5742..7274 FT /note="putative" FT /note="ORF L1 from bp 5733 to 7274" FT /product="major capsid protein" FT /gene="L1" FT /note="putative" FT /codon_start=1 FT source 1..7860 FT /organism="Human papillomavirus type 2a" FT /sequenced_mol="DNA" XX SQ SEQUENCE 7860 bp; 2010 a; 1788 c; 2016 g; 2046 t; ataatgtata actataatcc tttatttaaa aatagggtgt gaccgaaaac ggtcagaccg 60 aattcggttg tatataaaca gaagcaggat gcacacaagg gcagggatgt ctgaggagaa 120 tccatgccct aggaacatct ttttgctttg caaagagtat ggtttggagc tagaggattt 180 gcgattgctc tgtgtatggt gcaaacggcc gttatcagag gctgacatat gggcatttgc 240 aataaaagaa ctgtttgtag tgtggagaaa gggcttccca tttggagcct gcggaaaatg 300 cctgattgca gcaggaaaac ttagacaata cagacattgg cattactcat gctacggaga 360 cacagtggag actgagacag gaatacccat acctcagctg tttatgagat gctatatttg 420 ccataagccc ctgagctggg aggagaagga ggcattacta gttggaaaca agcgtttcca 480 caacatatca ggccggtgga cgggacattg catgaactgc gggtcatcat gcacggcaac 540 cgacccagcc tcaaggacat tacactaata ttggatgaaa tacccgaaat tgttgaccta 600 cattgcgacg agcaatttga cagctcagaa gaagagaata accatcaact gacagaacca 660 gatgtgcagg cctacggggt ggtaactacc tgctgtaagt gtggcagaac cgtccggctg 720 gtggttgagt gcggacaagc agacctaaga gagctggaac agctgttctt gaagacgctg 780 actctagtgt gccctcactg cgcctagcgt tatggaggat tccgaaggta ccgacgggac 840 cgaggaggac gggtgccggg caggggggtg gtttcatgtg gaggccatta taacacacgg 900 ccagaggcag gtatccagtg acgaggacga ggacgaaaca gagacagggg aggatttaga 960 ctttatagac aatagggttc ccggagatgg gcaggaaatt cccttgcagc tatatgcaca 1020 acaaaccgct caggatgacg aagcaacagt gcaggcccta aaacgaaagt ttgtggccag 1080 tcctttgtct gcatgctcat gcatagagaa tgatttaagt cccagattag atgcaatctc 1140 cctaaacaga aagtcagaaa aggcgaagag gcgcttattc gagacagaac caccagacag 1200 tgggtatggc aatacgcaga tggttgttgg aacgccagag gaggtaacgg gggatgagga 1260 aagccaaggg gggcggccgg tggaggatca ggaggaggag cgtcaagggg gagacggaga 1320 ggcagatcta actgtacaca ctccacagtc aggaacagat gcggcgggta gcgtgctgac 1380 cttactaaga agtagcaatc tgaaggcgac gttgctgagt aagtttaagg acctgtttgg 1440 ggtgggattc tatgaactgg tcagacagtt caaaagcagc aagacagcat gtgcagactg 1500 ggtcgtctgc gcctatggtg tgtattatgc tgtagcggag ggtctaaaga aattaataca 1560 gccacataca caatatgcac atatacaggt acagaccagc tcgtggggca tggtggtctt 1620 tatgctgctg cgatacaact gtgcaaaaaa cagggactca gtgtccaaga acatgagcat 1680 gctgctaaac attcccgaaa agcatatgct catagaacca ccaaaactga gaagtacccc 1740 tgccgcctta tactggtaca agacggccat gggcaacgga agtgaggtat atggggaaac 1800 accagaatgg attgttagac agacgttggt aggacatagc atggaagacg aacagttcag 1860 actgtcagtt atggtacagt atgcatatga ccatgacatt gtagaggaaa gtgtgcttgc 1920 atttgagtat gcacaactag cagatgtgga tgccaatgca gcagcatttc taaacagtaa 1980 ctgtcaggcc aagtacgtga aggacgcagt gacaatgtgc aggcactata agcgtgcaga 2040 gagagaacag atgagtatgt cacagtggat aacattcaga ggaaataagg tatcagagga 2100 aggggactgg aagcccatag tcaggtttct aagacatcaa ggggtagagt ttgtgtcgtt 2160 cctagctgcc tttaaattgt tcctaaaagg cgtgccaaag aaaaattgta tagtgttcta 2220 tggacctgca gacacaggca aatcatattt ttgcatgagc ttgttgcagt tcctaggcgg 2280 cgctgttatc tcatatgcta attctagcag ccatttttgg cttcaacctt tatcagatag 2340 taagataggg ttactggacg acgcaacacc ccagtgttgg agttacatag atatatattt 2400 aagaaatctt ttggatggac acccagtgag catagacaga aagcacaaaa ctttgctgca 2460 gcttaagtgt ccacccctaa tgataacaac caacaccaat cctctagagg aggacagatg 2520 gaaatatttg cgcagcaggc tgacagtgtt tacatttaag aatccatttc cttttgcaag 2580 tccgggagag cccctgtacc cgataaataa tgcaaactgg aaatgctttt tccaaaggtc 2640 gtggtcccgc ttagacctaa acagtccaga ggagcaggac gacaatggaa acactggcga 2700 accgtttaga tgcgtgccag gagacgttgc tagaactgta tgaaaaggat agcaacaaac 2760 ttgaggatca gattaagcat tgggcgcagg tccggctaga aaatgtcatg ctgtttaagg 2820 cccgagaatg tggaatgaca cgagtcggct gtacagctgt gcctgccctc accgtgtcaa 2880 aagctaaggc atgtcaggcc atagaggtac agctggcatt acagacattg atgcagagtg 2940 cctatagcac ggaggcatgg accctacgag acacgtgtct ggagatgtgg gacgcacctc 3000 caaagaaatg ctggaaaaaa aaaggacaat cagtattagt gaaatttgat ggcagcagtg 3060 acagagacat gatatataca agctggggat tcatttatgt gcaggacact atcactgatt 3120 cctggcataa ggtgccaggg caggtggacg aactgggatt atattatgtg cacgatggtg 3180 tacgtgttaa ctatgtggac tttggaacag agtccttgac ctatggggtc accgggacgt 3240 gggaggtgca cgtggctggg actgttattc accatacatc cgcatctgtg tctagcaccc 3300 aggccagcgc ctcggacgac gaaccactat cccctattag aactgctgta tccccagtcc 3360 cagccccagt cgcagcctca gcagaatcaa caggagcagg aagagcagct ccgcccaccc 3420 aagcgttgtg ctccgcccag gcgccaacga gtccgccggc caagcgccag cgtgtcatcg 3480 tcggacagca gcatccccgg cccgactcta cgcgaacggt cggagagggg gaagtggagt 3540 gttacaacaa gcggagcatc agtgactcta accgcacaga ccccaggtgg ggccacggtg 3600 acactgactc tgtgcctgta atccacctga gaggtgatgc aaattgttta aagtgcttca 3660 gatacagggt gcaaaaacat aaagacgtac tgtatgccag ggtgtcctcc acgtggcact 3720 gggcgggtgg gaacggtgat aagacagcct ttgtaacact gtggtacacc agcgttgaac 3780 agcgtacaga gttcctgaca agagtcagta tacctaaggg attgatagca ttgccagggt 3840 atatgtctgc atttgtataa tcctacatgc ttgtataaac atatggtcca atacatttca 3900 aggcctgcct ccgcaacaca gccctggact actttctctg cgtggttgca gggtggacac 3960 atctgcttgt gctactgctc ttcctgtggc tctctcaact aacccccctt gtggcctatc 4020 tggtgttctt tttctgtgtc tatctggggc tgtggttgat atatgtgcag gccttttggt 4080 ttttaccata gtcgttatta tttcgccata cgttgctgct agcttgtata catagtctat 4140 atacccattg tgtgagattt gcaatgtacc ctgttgtgta taagggatct gagggaacat 4200 atcctgtggt actgtggggt catgatgatg ttcaatgtct gttggtgatt cttatcctaa 4260 tcgccttttt attgttgatg ttttatgtcc gtttgttaaa ccacacctaa cacccccact 4320 tttttatatt gttttgatac attttcattt tgatacattt gtgttttttt tgtatttgct 4380 gcgttttaat aaacgtgcaa ccatgtctat acgtgccaag cgtcgaaagc gcgcctcccc 4440 cacagacctc tatcgtacct gcaagcaggc aggtacctgc cccccagaca ttatcccaag 4500 agtggaacag aacactttag cagataaaat ccttaagtgg ggcagtttag gtgtgttttt 4560 tgggggtcta ggtataggca ccggcagcgg cacagggggg cgtactgggt acattcctgt 4620 aggttcgcga cccaccactg tagttgacat tggtccaacg cccaggccgc ctgttatcat 4680 tgaacctgtg ggggcctctg aaccctctat tgtcactttg gtggaggact ctagcatcat 4740 taacgcagga gcgtcacatc ccacctttac tggtactggt ggcttcgaag tgacaacctc 4800 caccgttaca gaccccgccg tcttggatat caccccctca ggtaccagtg tgcaggtcag 4860 cagcagtagc tttcttaacc cactatacac tgagccagct attgtggagg ctccccaaac 4920 aggggaagta tctggccatg tacttgttag tacagccacc tcagggtctc atggctatga 4980 ggaaatacca atgcagacgt ttgccacgtc ggggggcagc ggtacagagc ctatcagtag 5040 cacacccctc cctggcgtgc ggagagttgc cggaccccgc ctgtacagta gagccaatca 5100 gcaagtgcaa gtcagggatc ctgcgtttct tgcaaggcct gctgatctag taacatttga 5160 caatcctgtg tatgacccag aggaaactat aatatttcag catccagact tgcatgagcc 5220 accggatcct gattttttgg acatagtggc gttgcatcgt cccgccctca cgtccagaag 5280 gggtactgtc cgttttagta ggttgggacg cagggctaca ctccgcaccc gtagtggtaa 5340 acaaattggg gcacgggtgc acttctatca tgatattagc cctataggta ctgaggagtt 5400 ggagatggag ccactgttgc ccccagcttc tactgataac acagatatgt tatatgatgt 5460 ttatgctgat tcggatgtcc ttcagccatt gcttgatgag ttacccgccg cccctcgcgg 5520 ttcactctct ctggctgaca ctgctgtgtc tgccacctcc gcatctacac tacgggggtc 5580 cactactgtc cctttatcaa gtggtattga tgtgcctgtg tacaccggtc ctgacattga 5640 accacccaat gttcctggca tgggacctct gattcctgtg gctccatcct taccatcgtc 5700 tgtgtacata tttgggggag attattattt gatgccaagt tatgtcttgt ggcctaaacg 5760 acgtaaacgt gtccactatt tctttgcaga tggctttgtg gcggcctaat gaaagcaagg 5820 tatacctacc tccaacacct gtttcaaagg tgatcagtac ggatgtctat gtcacgcgga 5880 ctaatgtgta ttaccatggt ggcagttcta ggcttctcac tgtgggtcat ccatattact 5940 ctataaagaa gagtaataat aaggtggctg tgcccaaggt atctgggtac caatatcgtg 6000 tatttcacgt gaagttgcca gatccaaata agtttggcct gcccgatgct gatttgtatg 6060 atccagatac ccagagactt ctgtgggcgt gcgtgggagt agaggtgggc cgtgggcagc 6120 ctttgggtgt gggtgtgtct ggtcacccat attacaatag actggatgac actgaaaatg 6180 cacacacacc tgatacagct gatgatggca gggaaaacat ttctatggat tataaacaga 6240 cacagctgtt cattctgggc tgcaaacccc ctattggtga gcactggtct aagggtacca 6300 cctgtaatgg gtcttctgct gctggtgact gcccgcccct ccaatttact aacacaacta 6360 ttgaggacgg ggatatggtt gaaacagggt tcggtgcctt ggattttgcc actctgcagt 6420 caaataagtc agatgttcct ttggatattt gtaccaatac ctgtaaatat cctgattatc 6480 tgaagatggc tgcagagcct tatggtgatt ctatgttctt ctcgctgcgt agggaacaaa 6540 tgttcactcg tcattttttc aatctgggtg gtaagatggg tgacaccatc ccggatgagt 6600 tatacattaa aagtacctca gttccaactc caggcagtca tgtttatact tccactccta 6660 gtggctctat ggtgtcctct gaacaacagt tgtttaataa gccttactgg ctacggaggg 6720 cccaagggca caacaatggt atgtgctggg gcaatagggt ctttctgact gtggtggaca 6780 ccacacgtag cactaatgta tctctgtgtg ccactgaggc gtctgatact aattataagg 6840 ctaccaattt taaggaatat ctcaggcata tggaggaata tgatttgcag ttcatcttcc 6900 aactgtgcaa gataaccctt actcctgaaa ttatggccta tatacataat atggatcccc 6960 agttgttaga ggattggaac ttcggtgtac cccctccgcc gtctgccagt ttacaggata 7020 cctatagata tttgcagtcc caggctatta catgtcaaaa acctacacct cctaagaccc 7080 ctaccgatcc ctatgcctcc ctgacctttt gggatgtgga tctcagtgaa agtttttcca 7140 tggatctgga ccaatttccc ttgggtcgca agtttttgct gcagcggggg gctatgccta 7200 ccgtgtctcg caagcgcgcc gctgtttcgg ggaccacgcc gcccactagt aaacgaaaac 7260 gggtaaggcg ttagctctca gtgtcgcatc atttcctctg ttctactttt tacatattat 7320 tttgttgtct gtaatatgtt tatgttgttg ttgtgcttat attacatgta tacatgtatg 7380 gtatgtatcc cctcccgtat gaataaacgt gtgtcatgtg ttgtgtgttc tgtaactgta 7440 cgttctggtg cacagatttc tgcaccccat cgccttgtgt gtagccccca gtttcatgca 7500 accgttttcg gttgcgtgca gtttcggtcg gcgccgttgc caacccagct taatccttta 7560 attgctctca tcctaaagtg ttatctgtgc cagcgacgat gagtttggat tttggttgtt 7620 taatgctttt tcttttcagt ttttcctttg tttgtgccag gccgcgagag ggcgtgcaca 7680 ttcctaggct gattatctta atgtgtttgg cacatctttg tactgcgtct gcagaaaaac 7740 ctgcagcaac agcactttgg gcgcgtcgtt tttgcagcca actttcactt gccaacttgc 7800 cttgccgcgc attccaagaa acacacctat tccggtcgca atgtctacta tgtgtggttt 7860 //