ID   HPV29MY911	STANDARD;	ds-DNA;	VRL;	11 bp.
XX
DE   Human papillomavirus type 29 (HPV-29), partial L1 cds, My09/My11 region. 
XX
AC   U12503
XX
DT   16-OCT-1994
XX
OS   Human papillomavirus type 29 DNA. 
OC   Human papillomavirus type 29;Viridae; ds-DNA nonenveloped viruses; 
OC   Papovaviridae;Papillomavirus.
XX
RN   [1]
RP   1 - 455
RA   Bernard,H.-U., Chan,S.-Y., Manos,M.M., Ong,C.-K., Villa,L.L.,Delius,H., 
RA   Peyton,C.L., Bauer,H.M., and Wheeler,C.M;
RT   "Identification and assessment of known and novel human 
RT   papillomaviruses by PCR amplification, restriction fragment length 
RT   polymorphisms, nucleotide sequence, and phylogenetic algorithms;"
RL   J. Infect. Dis. (1994) In press.
XX
XX   Created by HPV database on 21-APR-1995 from GenBank: U12503.
XX
XX   HPV-29 was originally isolated from a skin wart.  Subsequent
XX   tests failed to detect it in cutaneous wart specimens from 119
XX   patients, including both butchers and immunosuppressed patients.
XX   These latter were included in the study on the basis of HPV-29's
XX   similarity to members of the group including HPV-10 and HPV-3,
XX   which are frequently detected in such patients.  It thus seems
XX   to be a relatively uncommon member of this group (Favre et al.
XX   J. Virol. 63, 4906).
XX
XX   Cloned HPV-29 DNA was obtained from the Papillomavirus Reference
XX   Center, Heidelberg and subsequently sequenced by Dr. H. Delius over
XX   the L1 MY09/MY11 segment.  HPV-29 and the several other HPV types
XX   recently sequenced over this region by Dr. Delius were used as 
XX   type-specific probes to screen DNA for novel genital HPV types.
XX   The screened DNA was obtained from four recent epidemiological 
XX   studies [1].  Primer regions are annotated in the sequence;
XX   information in this region is not accurate due to primer
XX   degeneracy.
XX
XX
FT  KEY              Location/Qualifiers
FT   CDS             <1..>455
FT                   /note="putative"
FT                   /product="major capsid protein"
FT                   /gene="L1"
FT                   /note="putative"
FT                   /codon_start=1
XX
SQ   SEQUENCE  11 bp;  132 a;  92 c;  99 g;  132 t;
     gcgcagggac acaacaatgg tatatgctgg gccaatcagg tatttttaac tgtggtggac        60
     accacacgca gcaccaatat gtcgttgtgt gctaccacag agtctcaacc gttgaccact       120
     tatgatgcta ccaagattaa agaatatttg agacatgggg aggaatatga tttgcagttt       180
     attttccagt tgtgtaaagt tacattgaca cctgaaatta tggcttacct tcatactatg       240
     aacagtgcct tacttgaaga ctggaatttt ggattgacat tgccaccttc cactagcttg       300
     gaagacacgt ataggtttgt aacatcctct gccataactt gtcaaaaaga tttggcccct       360
     acagaaaagc aggatccgta tgcaaagcta aatttctggg atgtagattt aaaggataga       420
     tttaccctgg atttgtcaca gtttcccctg ggacg                                  455