ID HPV23 STANDARD; ds-DNA; VRL; 7324 bp. XX DE Human papillomavirus type 23 (HPV23), complete genome. XX AC U31781 XX DT 04-JUL-1995 XX OS Human papillomavirus type 23 DNA. OC Human papillomavirus type 23;Viridae; ds-DNA nonenveloped viruses; OC Papovaviridae;Papillomavirus. XX RN [1] RP 1 - 7324 RA Delius,H; RT "Direct Submission;" RL Unpublished. XX RN [2] RP RA Kremsdorf,D., Favre,M., Jablonska,S., Obalek,S., RA Rueda,L.A.,Lutzner,M.A., Blanchet-Bardon,C., Van Voorst Vader,P.C., and RA Orth,G; RT "Molecular cloning and characterization of the genomes of nine newly RT recognized human papillomavirus types associated with RT epidermodysplasia verruciformis;" RL Journal of Virology 52(3), 1013-1018 (1984). XX XX Created by HIV database on 1-NOV-1995 from GenBank: U31781. XX XX XX FT KEY Location/Qualifiers FT CDS 200..673 FT /note="ORF E6 from bp 194 to 673" FT /product="transforming protein" FT /gene="E6" FT /note="putative" FT /codon_start=1 FT /translation="MQTVHYLSRMCYTKLLMDSTRPLTVQQLSDKLTVPVVDLLLPCR FT FCSRFLTYLELREFDYKHLQLIWTEEDFVFACCSGCAYASAQFEIQQFYQLTVYGREI FT EQEEQRPIGQICIRCQYCLKSLDLIEKLDICSFNQPFHKVRNHWKGRCRHCKEIE" FT CDS 670..963 FT /note="ORF E7 from bp 661 to 963" FT /product="transforming protein" FT /gene="E7" FT /note="putative" FT /codon_start=1 FT /translation="MIGKQATLRDIVLEELVQPIDLHCHEELTEEVEEAVVEEEPEYT FT PYKIIVVCGGCETQLKLYVLATDFGIRSFQASLLENVKLVCPACREDIRNGRR" FT CDS 950..2773 FT /note="ORF E1 from bp 914 to 2773" FT /product="replication protein" FT /gene="E1" FT /note="putative" FT /codon_start=1 FT /translation="MDDDKGTDTAKEGCSTWCLLEAACSDDSDLDDSLEKLFEENAES FT DVSDLINDDDNAAQGNSRELLCQQESEECEQQIQYLKRKYNISPEAVQQLSPRLQSLN FT LSPGHKSKRRLFVEQDSGLELSLNEVEDFTQELEVPASAPGPAAQGGVGLGHIESLLR FT CKNAKAVLLHKFKEGFGISYNELTRQFKSNKTCCKHWVLAIYGAKEELIDASKQLLQQ FT HCSYIWLQTYTPMSLYLCCFNVAKSRETVVKLLISMLQIHENHILSEPPKNRSVPVAL FT FWYKGSMNPNVYAFGEYPEWIVTQTMIQHQTADSIQFDLSRMIQWAYDNDHLDECSIA FT YNYAKLADTDSNARAFLAQNSQAKHVRDCAQMVKHYKRGEMREMTISAWVHHCISRIE FT GDGQWQDIVKFLRYQGLNFIVFLDKFRTFLQNFPKKNCLLIYGPPDTGKSMFTMSLMK FT ALRGQVISFANSKSQFWLQPLADAKIALLDDATEVCWQYIDMFLRNGLDGNVVSLDMK FT HRAPCQMKFPPLIITSNISLKKEKKFPYLHSRIYEFEFPNRFPFDSDDKPLFKLTDQS FT WASFFKRLWIQLGLSDQEDEGEDGSTQRTFQCTTRQVNGPV" FT CDS 2715..4010 FT /note="ORF E2 from bp 2685 to 4010" FT /product="regulatory protein" FT /gene="E2" FT /note="putative" FT /codon_start=1 FT /translation="MEALSERFSALQDKLMDLYESGLEDLETQIQHWKLLRQEQILLY FT YARKRGIMRLGYQPVPPLATSEIKAKDAIAIGILLESLQKSKYADEPWTLVETSLETI FT RSPPVDCFKKGPKTVEVYFDGDPENVMPYTVWSYIYYQTDEDTWEKVEGHVDYTGAYF FT YEGQLKNYYIKFEADAKRFGTTGMWEVHVNKDTVFTPVTSSTPPVGDASNNAVPEAST FT TSLSSPQRSPSTNRRYGRKASSPTATTRRQKRQGKETLTRRRKTRSRSRSREQRGGRE FT TQRSSSRGASKSPRRGGRSGGGPLTRSRSRSRSPESVTGGGVAPSEVGASLRSVSRHS FT SGRLAQLLDAAKDPPVILLRGGANTLKCYRYRFRKKHAGKFYYVSTTWSWIGGHSTDR FT VGRARMLIAFHSNHEREKCIQEMKLPLGVDWSYGQFDDL" FT CDS <3037..3765 FT /note="ORF E4 from bp 3037 to 3765" FT /gene="E4" FT /note="putative" FT /codon_start=1 FT /translation="IALKRDLKQWRCILMEILKMLCHIQYGLIFTIKLMRTLGKRLKD FT MWIIQELIFMRANLKTITLNLKQMQSALVLQECGKYMLIKILSLPLLLVLRRQLETPP FT TTPFPKHLPPPCPPHNGHHPPTADTAEKHLALQPPPGGKKDKEKKPSPGEEKPDQGPG FT AESNGGGGKPKDPPPEEPQNPPGGEGEVEGGPSPAPDQDPDHQSLLQGVALHLVKWER FT HFDQLVDTVVEDLRNYWMQLKTPQ" FT CDS 4090..5649 FT /note="ORF L2 from bp 4027 to 5649" FT /product="minor capsid protein" FT /gene="L2" FT /note="putative" FT /codon_start=1 FT /translation="MVRAQRTKRASVTDIYKGCKASGTCPPDVLNKVEQNTLADKILK FT YGSVGVFFGGLGIGTGKGTGGATGYVPLRPGVRVGGTPTVVRPAVIPEIIGPTELIPV FT DSIAPIDPEAPSIVSLTDSGAAADLFPSEAETIAEVHPTPVDIGIDTPIVAGGRDAIL FT EVVDTNPPTRFSVTRTQYDNPSFQIISESTPITGEASLADHVFVFEGSGGQHVGAVTE FT EIELDTYPSRYSFEIEEATPPRRTSTPIERISQEFRNLRRALYNRRLTEQVQVKNPLF FT LTTPSKLVRFQFDNPVFDEEVTQIFERDVAEVEEPPDRDFLDIDRLGRPLLTESTEGR FT IRLSRLGQRASIQTRSGTRVGSRVHFYTDLSTINTEEPIELELLGEHSGDASVIEEPL FT QSTVIDMNLDDVEAIQDTIDTADDYNSADLLLDNAIEEFNNSQLVFGTSDRSSSAYSI FT PRFESPRETIVYVQDIEGNQVIYPGPTERPTIIFPLPSAPAVVIHTLDKSFDYYLHPS FT LRKKRRKRKYL" FT CDS 5660..7180 FT /note="ORF L1 from bp 5618 to 7180" FT /product="major capsid protein" FT /gene="L1" FT /note="putative" FT /codon_start=1 FT /translation="MTLWLPASGKIYLPPTPPVARVQSTDEYVERTDIYYHATSDRLL FT TVGHPYFDVRSPDGSKIDVPKVSGNQFRAFRVTFPDPNKFALADMTIYDPDKYRLVWA FT CAGLEIGRGQPLGVGSTGHPLFNKLRDAENSSERQEGTVDDRRNISFDPKQVQMFIIG FT CTPCLGEYWDTAPVCKDAGSQLGLCPPLELKNSVIEDGDMFDIGFGNINNKTLSFNRS FT DVSLDLVNEVCKYPDFLTMSNDVYGDACFFCARREQCYARHYFVRGGVVGDAIPDGAV FT QQDHKYYLPADQQNTLENSLYFPTVSGSLVTSDSQLFNRPFWLKRAQGHNNGILWNNQ FT MFVTVADNTRNTNFSISVTNDSSLEKYDATKIREFTRHVEEYQLSFILQLCRIPLKAE FT VLTQINAMNSDILENWQLGFVPTPDNAVHDTYRYLASKATKCPDAVPDTQKEDPFGKY FT SFWNVDMTEKLSLDLDQYPLGRKFLFQIGVQRVRSGTKRPATRKVTKTVKRKKVQL" FT source 1..7324 FT /organism="Human papillomavirus type 23" XX SQ SEQUENCE 7324 bp; 2331 a; 1328 c; 1592 g; 2073 t; agcagatacc atcagcacct ggagcgaccg ccaagacttc gccaacttgg cagaacattt 60 gttggcaaga aaagagcacc gataacggta agaactttta ttttttgacc gtaggcgttc 120 atttactaac cttggcaaca attgtggtta acaacaatca taagccaata atacatgcaa 180 ccgcttgtgg taatttatta tgcagactgt gcattattta agtaggatgt gctacaccaa 240 attattgatg gactcgacgc gaccactgac ggtacagcaa cttagtgata agttgacagt 300 accagtggta gatctcttgc taccttgcag attttgttct aggtttctta cctatttaga 360 gttgcgagaa tttgattata aacatttgca gttaatctgg acagaagaag attttgtatt 420 tgcatgctgc agtggctgtg cttatgcttc tgctcaattt gaaattcaac aattttatca 480 gctaactgtg tatggtcgtg aaattgagca ggaggagcaa cgacctatag gccaaatttg 540 tattaggtgt cagtattgtt tgaagtctct cgatttgata gaaaagctag atatctgtag 600 ttttaatcaa ccatttcaca aggttagaaa tcattggaag ggaaggtgca ggcattgtaa 660 ggaaatagaa tgattgggaa acaagctact cttcgtgata tagttcttga agagcttgtc 720 cagcccattg acctgcattg ccacgaggag ctcactgaag aggtagaaga agcagtcgta 780 gaggaggagc ctgaatacac tccttacaag atcatcgtag tttgtggagg ctgtgagaca 840 cagttaaagc tttacgtgct agccacagat tttggaattc gctcgttcca agcatctttg 900 ctagaaaacg tgaagctggt gtgtcctgcc tgtcgagaag acattcgcaa tggacgacga 960 taaaggtact gatactgcta aagaaggctg tagtacttgg tgcttattag aggctgcttg 1020 ttctgatgat agtgacctag atgatagttt ggagaaatta tttgaagaga atgcagagtc 1080 agatgtgtct gatttaataa atgatgatga taatgctgct cagggaaatt cccgcgaatt 1140 gctatgtcaa caggagagtg aggaatgcga gcagcaaata caatacctaa aacgaaagta 1200 taatatcagt ccagaggctg ttcagcagct tagtccacgt ctacagtctt tgaatttgtc 1260 gcctgggcat aaatctaaaa ggagattgtt tgtggagcaa gacagcggac tggagttatc 1320 tctaaatgaa gttgaagatt ttactcaaga gttggaggta ccggcgagcg ctccagggcc 1380 ggcagcccag ggtggagtag ggctgggaca tattgaaagt ttgttaagat gtaaaaatgc 1440 taaagcagtg ttgctacata aatttaagga aggttttgga attagttata atgagcttac 1500 cagacagttt aaaagcaata agacctgctg taaacattgg gtattggcca tatatggtgc 1560 aaaagaagag ctcatagatg cgtctaagca attgttacaa cagcactgtt cttatatttg 1620 gttgcagaca tacacaccta tgtcacttta tttatgttgc tttaatgttg caaaaagtag 1680 agaaacagtt gtaaaattat tgatttctat gctgcaaata catgaaaatc atatattatc 1740 agaacctccg aaaaacagaa gtgtacctgt agctttattt tggtataaag gcagtatgaa 1800 ccctaatgta tatgcatttg gtgagtatcc tgagtggatt gtgacacaaa ccatgataca 1860 acatcaaact gctgacagta tacaatttga tttgtctcgt atgattcaat gggcctacga 1920 taatgatcat cttgacgaat gtagtattgc ttataactat gcaaaattgg ctgacacaga 1980 cagcaatgca agagcttttt tagctcaaaa tagccaagca aaacatgtaa gagattgtgc 2040 acagatggtt aagcattata aaagaggtga aatgcgagaa atgactattt ctgcatgggt 2100 acatcattgc atatctagaa ttgaaggtga tggacaatgg caagatattg ttaaattttt 2160 gcgctatcag ggattaaact tcattgtatt tttagataaa tttagaacgt ttttacagaa 2220 ttttccaaaa aaaaattgtt tgttaatata tgggcctcca gacacaggca aatcaatgtt 2280 tactatgtct ttaatgaaag cactaagagg tcaagtaata tcgtttgcaa attctaaaag 2340 ccaattttgg ctgcaaccat tagctgatgc aaagatcgcc ttattagatg atgcaacaga 2400 agtttgttgg caatatattg atatgtttct tcgaaatgga ttggatggta atgtagtgtc 2460 gttggatatg aaacatagag caccatgtca aatgaaattt ccaccattaa ttattacatc 2520 taatattagc cttaagaaag aaaagaagtt tccttacttg catagtagaa tatatgaatt 2580 tgaatttcca aacagatttc catttgattc agatgataaa cctttgttta aacttactga 2640 ccaaagctgg gcgtcttttt ttaaaaggct ttggatacaa ttaggactca gtgaccaaga 2700 ggacgaggga gaggatggaa gcactcagcg aacgtttcag tgcactacaa gacaagttaa 2760 tggacctgta tgaatcaggt ttagaggatc ttgaaactca aatacagcat tggaaactct 2820 taagacaaga acaaatttta ttgtattatg ctcgaaaacg tggaattatg cgtttggggt 2880 accagccggt acctcctctg gcaacatcag aaattaaagc aaaagatgct atagcaattg 2940 gaattttgct ggaaagttta caaaaatcca aatatgcaga tgagccatgg acattagttg 3000 agactagctt ggagacaatt agaagtccac cagtagattg ctttaaaaag ggacctaaaa 3060 cagtggaggt gtattttgat ggagatcctg aaaatgttat gccatataca gtatggtctt 3120 atatttacta tcaaactgat gaggacactt gggaaaaggt tgaaggacat gtggattata 3180 caggagctta tttttatgag ggccaactta aaaactatta cattaaattt gaagcagatg 3240 caaagcgctt tggtactaca ggaatgtggg aagtacatgt taataaagat actgtcttta 3300 cccctgttac tagttctacg ccgccagttg gagacgcctc caacaacgcc gttcccgaag 3360 catctaccac ctccttgtcc tccccacaac ggtcaccatc caccaaccgc cgatacggcc 3420 gaaaagcatc tagccctaca gccaccacca ggaggcaaaa aagacaagga aaagaaaccc 3480 tcaccaggcg aagaaaaacc agatcaaggt cccggagcag agagcaacgg ggggggaggg 3540 aaacccaaag atcctcctcc agaggagcct caaaatcccc ccggcgggga gggagaagtg 3600 gaggggggcc cctcacccgc tccagatcaa gatccagatc accagagtct gttacagggg 3660 gtggcgttgc acctagtgaa gtgggagcgt cacttcgatc agttagtaga cacagtagtg 3720 gaagacttgc gcaactattg gatgcagcta aagacccccc agtaatattg ctgcgcggcg 3780 gtgcaaatac attaaaatgc tatcgctata ggtttagaaa aaagcatgct ggtaaatttt 3840 attatgttag cacaacgtgg tcatggattg ggggtcattc tactgataga gtagggcgtg 3900 caaggatgtt aatagcattt cattctaatc atgaaaggga aaaatgtatt caagaaatga 3960 agttaccttt aggagtagat tggtcctatg gacaatttga tgatttataa cctgcttttt 4020 atttaacaca ctaacattgc ctattgctat ttttttacta acttatattg ctatattgct 4080 actaacatta tggtacgggc gcaaagaact aagcgagcgt ctgttactga tatatacaaa 4140 ggctgtaaag cctctgggac ttgtccccct gatgtactaa ataaagtgga acaaaataca 4200 cttgctgata aaatacttaa atatggcagt gttggtgtgt tttttggtgg acttggaatt 4260 ggtacaggta agggtaccgg tggtgccacg gggtacgtcc cattgcgacc tggagtacga 4320 gtgggcggta ctcctacagt ggtccgccct gcagtcatac ctgaaataat tggaccaact 4380 gaattaatac cagttgactc aatagcacca attgaccccg aagcaccatc aatagtctca 4440 ttaacagaca gtggcgcagc tgctgacctt ttccccagtg aagcagaaac tattgcagag 4500 gtacatccta cacctgtaga cataggaatt gatacaccta ttgtagctgg aggccgtgac 4560 gccattttag aggtggtaga tactaatcct ccaacaaggt tcagtgtaac aagaacacaa 4620 tatgataatc catcttttca aataatttca gaatccacac ctatcacagg tgaggcatcc 4680 cttgctgatc atgtatttgt gtttgaaggt tctggaggtc agcacgtagg agcggtaact 4740 gaagagattg aattagatac atatccttcc agatattcct ttgaaattga ggaagctaca 4800 ccaccacgca gaactagtac tcccattgaa agaataagtc aggaattcag gaacctacgt 4860 agagcactgt ataacaggcg cttaacagaa caggttcaag taaaaaaccc tttattttta 4920 actactccat ctaaacttgt aagatttcaa tttgataatc ctgtgtttga tgaagaggtc 4980 acacaaatat ttgaaagaga tgttgctgaa gtggaggaac ctccagatag ggacttttta 5040 gatatagaca gattaggaag accattatta acagaatcca ctgaaggccg tattagatta 5100 agtaggttag gtcaaagggc ttccattcaa acacgcagtg gaacacgtgt tggttcacgt 5160 gtacacttct atacagattt aagcactatt aatacagaag aacctataga attagaatta 5220 ttaggcgagc attctggaga tgcatcagtt attgaggaac ctctgcaaag cactgtaata 5280 gatatgaact tagatgatgt tgaggctatt caggatacta tagatactgc agatgattat 5340 aactctgcag atcttttatt ggacaatgca attgaagaat ttaataattc tcaattagtg 5400 tttggcactt ctgatagatc ttcgtctgca tattctatac cacggtttga atcccctaga 5460 gaaacaattg tatatgttca agatatagaa ggtaatcagg taatttatcc tgggcccaca 5520 gaaaggccaa ctataatatt tcccttacct agtgcccctg ctgtagtcat acacacattg 5580 gacaagtctt ttgattatta cttacatccc agcttaagaa agaaaaggcg caaacgcaaa 5640 tatttataat gtttttcaga tgaccctctg gcttccagct tctggtaaga tatatttacc 5700 tcctacgcca cctgtagccc gagtgcagag tacggatgaa tatgtggaaa gaactgacat 5760 ctattaccat gcaactagtg atcgattact aactgtaggc cacccatatt ttgatgttag 5820 atcaccggat ggtagtaaaa tagatgtacc aaaggtttca gggaatcaat tcagggcctt 5880 tagagttaca tttccagacc ctaataagtt tgcattagca gacatgacta tctatgatcc 5940 tgataaatac aggttggtgt gggcctgcgc aggacttgaa atcggccgcg gccaaccttt 6000 aggggtcggc agtacaggac acccgctatt taataagctc cgtgatgcag aaaattctag 6060 tgaacgtcag gaaggtactg tagatgacag aagaaatatc tcatttgatc ctaagcaagt 6120 acagatgttt ataattggtt gcacaccgtg cttaggtgaa tattgggata cagctcctgt 6180 ctgtaaagat gcaggtagcc aactagggtt gtgtcctcct ttagaattaa aaaacagtgt 6240 tatagaagat ggggacatgt tcgacattgg ctttggtaat atcaataata aaacattatc 6300 ctttaataga tcagatgtta gtttagatct tgtaaatgag gtttgcaaat atccagactt 6360 tttgactatg tcaaatgatg tatatggaga tgcctgtttt ttttgtgccc gaagagagca 6420 atgctatgcc aggcactatt ttgttcgagg cggtgtagta ggagatgcaa tacctgatgg 6480 tgcagttcaa caggatcaca aatattattt acctgcagac caacaaaaca ctttagaaaa 6540 ctcactttat tttcctactg tcagtggatc tttggtaact tctgattctc aactttttaa 6600 tagaccattt tggttaaaac gtgctcaagg ccataacaat ggtattttat ggaacaacca 6660 gatgtttgtg actgtagcag ataatacacg taatacaaac tttagtatca gtgttaccaa 6720 tgacagcagt ttagaaaagt atgatgccac taaaattaga gagtttacaa gacatgttga 6780 agaataccaa ctttctttta tactacagtt gtgcaggata cctttaaagg ccgaggtctt 6840 aacacaaatt aatgccatga attcagatat tttagagaat tggcagttag ggtttgttcc 6900 tacaccagat aatgcagttc atgacacata cagatatttg gcttcaaagg ccacaaaatg 6960 tccagatgca gtacctgaca cgcaaaaaga ggatcctttt ggaaagtatt cattttggaa 7020 tgttgatatg acagaaaaat tgtctctaga cctagatcaa tatcccttag gccgtaagtt 7080 tctgtttcaa attggagtgc agcgtgtacg gtccggtacc aaacggcctg caactcgaaa 7140 agtgaccaaa actgtcaaaa ggaaaaaagt gcaattgtaa ccgatatcgg tcgccaataa 7200 aatatgttaa ctaatctggt atgtgaagta ttttttaacc gtctttgtga ctaaaccgaa 7260 caagtcaaca ccagcaaccg cacccgtttc cacattataa attcctcgag gtaagattat 7320 gatc 7324