ID   ROPVE2L2	STANDARD;	DNA;	VRL;	1519 bp.
XX
DE   Rabbit oral papillomavirus DNA fragment with partial E2, E4 and L2 
DE   coding regions. 
XX
AC   M19497
XX
DT   17-MAY-1995
XX
OS   Rabbit papillomavirus (clone: ROPV B and ROPV C) DNA. 
OC   Papillomavirus sylvilagi;Viridae; dsDNA nonenveloped viruses; 
OC   Papovaviridae.
XX
RN   [1]
RP   1 - 1519
RA   O'Banion,M.K., Cialkowski,M.E., Reichmann,M.E. and Sundberg,J.P;
RT   "Cloning and molecular characterization of an oral papillomavirus of 
RT   domestic rabbits;"
RL   Virology 162 (1), 221-231 (1988)full automatic.
XX
XX   Created by HIV database on  1-NOV-1995 from GenBank: M19497.
XX
XX   The rabbit oral papillomavirus, the second papillomavirus discovered
XX
FT  KEY              Location/Qualifiers
FT   source          1..1519
FT                   /organism="Rabbit papillomavirus"
FT                   /clone="ROPV B and ROPV C"
FT                   /sequenced_mol="DNA"
FT                   /specific_host="New Zealand White"
FT   CDS             <1..802
FT                   /gene="E2"
FT                   /note="NCBI gi: 333536"
FT                   /codon_start=2
FT                   /translation="VPSTVDEKGVYYRDTEGNNIYYVDFETDAARFSSKGEYEVVYKS
FT                   QKLSVSSVTSSTPLRPIALGNTLDNATASPAPAVSAGPAHHPQTPVKSLSGPVSRYGR
FT                   RRSRSPGVGFDPARSRRQGKHPTDFNANTISADSTDSTDFSPAFRPPTPSEVGRRNTT
FT                   APRESARGLGGRVRQLISEARDPPVICLKGGNNQLKCLRYRLKAKHRTLFDCISTTWS
FT                   WVDNSSTCRVGSGRVLIKFKDEAQREKVLEEVPIPRHMQVFVGNFFGL"
FT   CDS             <1..557
FT                   /gene="E4"
FT                   /note="NCBI gi: 333535"
FT                   /codon_start=3
FT                   /translation="YLALLMRRGCIIGIQKETIYIMWTLRLMLHAFQAKESMKLYIKA
FT                   KNFLCPLLPAQPPYGPSLLATPLTTPPRRPPLQYPQAPRTIRKPRSSRYRGRFLVTDG
FT                   GDPDPQELDSTQQDPEDKENIPPTSTPTPSPPTPPTPPTSRPPLDHLLLQRLEEEIRQ
FT                   LQESLQEDLEEEFGNLYLRLGIRQ"
FT   CDS             853..>1519
FT                   /gene="L2"
FT                   /note="Open reading frame starts at 817; putative;  NCBI
FT                   gi: 808808"
FT                   /codon_start=1
FT                   /translation="MVLRTRKRRAAPQDIYPACKISNTCPPDIINKYENKTVADKILQ
FT                   YGSLGVYFGGLGIGTGTGSGGRGGYVPLGGSSGGRVVGGSAVRPPIPTDTVGPLEVIP
FT                   EAVDPAGLSIVPLEEYPAEIPTTSGTNVIGEGGAQPPPSSGGGSAILDVISEESGVTS
FT                   RTHFNNPTFEAPNTNNISVPDIVDPQPEDIVISYTDAPEPGELIELVPCIRGETLTYK
FT                   RTYH"
FT   polyA_signal    943..948
FT                   /note="putative"
FT   polyA_signal    955..960
FT                   /note="putative"
XX
SQ   SEQUENCE  1519 bp;  438 a;  365 c;  367 g;  349 t;
     ggtacctagc actgttgatg agaagggggt gtattatagg gatacagaag gaaacaatat        60
     atattatgtg gactttgaga ctgatgctgc acgcttttca agcaaaggag agtatgaagt       120
     tgtatataaa agccaaaaac tttctgtgtc ctctgttacc agctcaaccc ccctacggcc       180
     catcgctctt ggcaacaccc ttgacaacgc caccgcgtcg cccgcccctg cagtatccgc       240
     aggccccgcg caccatccgc aaaccccggt caagtcgtta tcggggccgg tttctcgtta       300
     cggacggagg agatccagat ccccaggagt tggattcgac ccagcaagat ccagaagaca       360
     aggaaaacat cccaccgact tcaacgccaa caccatctcc gccgactcca ccgactccac       420
     cgacttctcg cccgccttta gaccacctac tccttcagag gttggaagaa gaaatacgac       480
     agctccaaga gagtctgcaa gaggacttgg aggaagagtt cggcaactta tatctgaggc       540
     tcgggatccg ccagtgatct gtttaaaagg gggcaacaac cagcttaagt gcttaaggta       600
     tcgcttaaaa gccaaacacc gcactttgtt tgactgtatt agtaccacat ggagttgggt       660
     agataatagc agcacatgta gagtaggtag tgggagagtg ctgataaaat tcaaagatga       720
     agcacaacgt gaaaaggttt tagaggaggt accgataccc agacatatgc aagtgtttgt       780
     tgggaacttc tttggcttgt aaatgcatta ctgtgaatta tctgtatctg tgaaatttgt       840
     acattgttta caatggtgct acgcacgcgc aagcgcagag ctgctccaca agacatttat       900
     cctgcatgca aaatatctaa cacatgtccc ccagacatta ttaataaata tgaaaataaa       960
     acagtggctg acaagatttt acagtatgga agtcttggag tgtactttgg gggtttggga      1020
     ataggtactg gaactgggtc gggtggcaga ggtggttatg ttcccttggg aggctcatca      1080
     ggcggacggg tagtaggtgg ctctgctgta agaccaccta tccctacaga cactgtaggt      1140
     cctttagaag taatccctga agcggttgac cccgcaggtc tttcaatcgt tccccttgaa      1200
     gaatatcctg ctgaaatacc aacaacaagt ggcactaatg tcataggtga aggaggtgcc      1260
     cagcccccac ccagttcagg gggcggcagc gcaatcctgg acgtaatcag cgaggaaagt      1320
     ggagtcacaa gcagaacaca ctttaataac cccacctttg aagcccccaa tacaaataat      1380
     attagtgtcc ctgacattgt agacccccaa ccagaagaca tagttattag ctacacagat      1440
     gccccagaac ctggtgagct catagaattg gtaccttgca tcaggggaga gacattgaca      1500
     tacaagagaa cctatcata                                                   1519