ID MnPV STANDARD; DNA; Circular; 7687 bp. XX DE Mastomys natalensis papillomavirus (MnPV), complete genome. XX AC U01834 XX DT VRL XX OS Mastomys natalensis papillomavirus, isolated from a rat species native OS to southern Africa afflicted by a high incidence of skin tumors. Clone OS obtained from German Cancer Research Center from a population of rats OS established in 1969. OC Mastomys natalensis papillomavirus;Viridae; Viruses; Papovaviridae; OC Papillomavirus. XX RN [1] RP 1 - 7687 RA Tan,C.H., Tachezy,R., van Ranst,M., Chan,S.Y., Bernard,H.U. RA andBurk,R.D; RT "The Mastomys natalensis papillomavirus: Nucleotide sequence, genome RT organization, and phylogenetic relationship of a rodent papillomavirus RT involved in tumorigenesis of cutaneous epithelia;" RL Virology 198, 534-541 (1994)full automatic. XX RN [2] RP 1 - 7687 RA Chan,S; RT "Direct Submission;" RL Submitted (15-SEP-1993) Shih-Yen Chan, Institute of Molecular andCell RL Biology, National University of Singapore, Lower Kent RidgeRoad, RL Singapore, 0511, Republic of Singaporefull staff review. XX XX Created by HIV database on 1-NOV-1995 from GenBank: U01834. XX XX In 1978, Muller et al. isolated and cloned the first rodent XX FT KEY Location/Qualifiers FT CDS 101..508 FT /note="putative" FT /note="ORF E6 from bp 7569 to 508" FT /product="transforming protein" FT /gene="E6" FT /note="putative" FT /codon_start=1 FT /translation="MDRTVHSFVERLGIPREDLLLPCTFCSRFLTQEELTAFDFSAFN FT LVWRGRCAHGICTACARVCASLDLFLHHQNSRPLADVLRDENLTLHGLKARCRVCMKI FT LSVTEKLECAERGESFAKVRGQWRARCRICKPV" FT CDS 510..800 FT /note="putative" FT /note="ORF E7 from bp 429 to 800" FT /product="transforming protein" FT /gene="E7" FT /note="putative" FT /codon_start=1 FT /translation="MIGPDTTRCLTGETPDSVSLYCHEVLDEDELKEPTEAAPPPEQY FT TLYQVLIECPECNKTIRLTCAAQAHQIRGLEHLLLDGLRVICPRCNQKNGRS" FT CDS 787..2595 FT /note="putative" FT /note="ORF E1 from bp 757 to 2595" FT /product="replication protein" FT /gene="E1" FT /note="putative" FT /codon_start=1 FT /translation="MEDLEEGTGEGCSGWFDREAICSDGSSDEEPNESFESIADMFDD FT GTQTQGNSLELFHTQEKEETRTQIQALKRKYIPSPEAGGDLSPRLRAISITPKKKKPS FT RRLFETPEDSGNGSLGNETTDTSSGFQVVGDSAVDVCDAGRLLNLNLLQSHNRVARLL FT AVFKEAYGVSYKELTREYKSDKTCNPDWVIALYSLSEPILNAARTTLQGICEYVFMQS FT RPTAAATVALLTVRFKCSKSRETVRKQMCGMFHSDPLLCLCDPPKVQSVPAALYWYKS FT SMYSGTFTHGEAPEWIKRQTMITCAMEETKFDLSEMVQWAYDNNYEDESQIAFEYART FT ATESPNANAWLASNAQAKHVRDCATMVRHYKRAEMKAMSMSQWVWKCCREEPEEGTWT FT PISLYLASEGVEVIRFLSAMKSWLRGIPKKNCLVFYGPPNTGKSLFTMSLIKFLRGRV FT ISFANSKSHFWMQPLAEAKVVLLDDATRATWDYVDTYMRNAMDGNPLSIDCKYRTPVQ FT VKCPPMLVTTNEDVHLNDRWRYLHSRIQVFHLKEPMPIDTAGNPEYSFSNRHWKAFFE FT KLQKPLDLSEDEGDPKDNGEHTQPFSCCARGTDVHV" FT CDS 2537..4165 FT /note="putative" FT /note="ORF E2 from bp 2510 to 4165" FT /product="regulatory protein" FT /gene="E2" FT /note="putative" FT /codon_start=1 FT /translation="MESIHSRLAAVQEELMCMYEDGEETLEAQLKHWGLLRKEQVLLH FT AARQHGHNKIGLQAVPPLSVTQQNAKNAIEMHLLLQSLAETPYAREAWTLSQTSREMY FT MAGPSGTFKKDGTIVEVIFDGDKTNMMTYTKWGKIYFADPNGNWSRTTSHTDINGIYF FT NKSGDKEYYVRFKEEAKRYSLTGTWEVHDGLETHSLLIPVTSSTPQTGFPRGDPVRLH FT GNTTTGLPIPLRNSSSNQILLREGRGDYPDGARRETRRYYQGPTPTPRSLSPPIYRPP FT PSYEESRRRRKLRRRQDGRVKYPASPYRTKPPGETSSDDEDEGRGGHEPRPQRRLPRG FT LRDRGERAPERRRPPVQEGEEDVDGVGALLDDLKLYQEPPGDPVEDSDSPGSRLTPAP FT PDLSRYDSTRLQVDAESSPPRTPRPAPTLVAECTPGRPSPQTGSGQQALGEPPSRPSR FT GHCRDPRTACLLIIKGSSNQVKCLRFRLKSWHHSLFSYISTTWQWVPSVGSNRIGRSR FT ILVMCEDSAQMDRFLCTVKIPAGMTVEQCSMASV" FT CDS >3169..3774 FT /note="putative" FT /gene="E4" FT /note="putative" FT /codon_start=1 FT /translation="RGSGTPSREYHHRTAHTASEQQQQPDITTRGKRRLSRRRTPRDE FT EVLPGANTDAQVSISPHLPSPAKLRRVEEEEEAKAPPRRASQIPRVSLQDKTTGGNQQ FT RRRRRGERGARTPSPETTAQRPKRPRRACTRKEETPSSGGGGGRGRRRGLAGRPEAVP FT RTTWRPSGGLGLPRQSSYPRPARPISVRLYPVTGGRGEQPS" FT CDS 4248..5813 FT /note="putative" FT /note="ORF L2 from bp 4233 to 5813" FT /product="minor capsid protein" FT /gene="L2" FT /note="putative" FT /codon_start=1 FT /translation="MSRRRKRHTRVPRDSATHIYQTCKQAGTCPPDVVNKVEGTTTAD FT KILQYGGAAVFLGGLGIGTGRGSGGATGYVPVGETPGISVGARPVPRPNVPLETVGPQ FT DLFPVDAIRPTDPSVIDVASVPTPTDTSINVPEVEVIAEIHPVPPDGPSNTPTTTINT FT SGSGDAAILEVAPEPSPAVRTRWRASKTTFHNPAFHSFSSTGSTVGEATGMDNIVVYS FT GSGGRTIGGDSIELMPFTSSDTLDLSIVEETSFGGRTSTPRTKPLPSRLPSRRYYEYR FT ESSLGELWSPRRAMGPTYINPAFEAEDSILFPECSMQAANPDYTGITRLGHLFGTEQG FT GRVRIGRLGQKTSLHTRSGMAIGPKAYFYKDISSISVVPEESIELSTYTSAAPLGEDA FT GIIVEDSMEGSFDNITLSSWSHGSMDGLLEDDASYDFHGHLVWGTRRSSKQISMPFRR FT SWYPETAVYVQEGGSVMDPEASAELVPSRDSARPHVIYRGYNGTDYYLHPSLSRRRRN FT SRHIYFSDGVLAA" FT CDS 5701..7293 FT /note="putative" FT /note="ORF L1 from bp 5647 to 7293" FT /product="major capsid protein" FT /gene="L1" FT /note="putative" FT /codon_start=1 FT /translation="MSYIGAIMGRTIIYTRHCPDAGVTAGISIFQMAYWLPNNQKLYL FT PPAPVQRILSTDEFTTRTDIYYYASSDRLLTVGNPYYPILDGDTVTVPKVSPNQYRVF FT RCKLPDPNRFAFGEKSVYDPEKQRLAWCIRGVEIARGQPLGIGITGHPLYNRLEDVEN FT PGKYPSAPGTDNRQNVGLDPKQTQMFIVGCVPAQGEHWSRALTCSNQVVKKGDCPPIQ FT RMSGMIEDGDMGDIGYGNLDFRVLQENKSEVPLEVVDSICKYPDYLGMSKETHGNSCF FT FYARQARLYSRHFFNRAGVQGETVPESLYKKGKDGQAQSTLALATYSGTPSGSLVSSD FT AVLFNRPYWLERAQGQNNGILWNNDLFVTVLDNTRGTHFSISIATQDENDYTASNYKQ FT YTRHVEEFELEFIFQLVKINLSTEVLAYLHGMDPSILDNWNLTLGPPNDGSLADKYRF FT IESLATKCPDNVEVTKPDPYKGRIFWNIDLTERLTADLDQFSLGRKFLYQHARISNRK FT RSLPASRNGGGTSSSSTKRRKK" FT source 1..7687 FT /organism="Mastomys natalensis papillomavirus" FT /specific_host="Mastomys natalensis" XX SQ SEQUENCE 7687 bp; 2036 a; 1821 c; 2035 g; 1795 t; gcaacaatct cctctccata cttttttcca ctgcaccggt atcgtacaaa catatataag 60 aagaccccat tggctatgga tttgttactg cggtagccgg atggatagga ccgtgcactc 120 ctttgtggag cggctgggaa ttcctcggga ggacctcctg ctgccgtgca cattctgctc 180 gaggtttctt acccaggagg aattaactgc atttgacttt agtgctttta accttgtttg 240 gagaggaagg tgtgcccatg gaatctgcac agcctgtgct cgtgtctgtg catccctaga 300 cctgtttctg caccatcaga attcgcgacc attagcagat gttctgcggg acgaaaatct 360 tacactccac ggactgaaag cacggtgtcg cgtgtgcatg aagatactgt cagtgacaga 420 aaagctagag tgtgcagaaa gaggggaatc ctttgccaaa gtcaggggcc agtggagggc 480 acggtgcaga atttgcaaac ccgtgtaaaa tgataggacc tgacaccacg cgctgtctca 540 ccggcgaaac tcctgactcg gtcagcctgt attgtcacga agttctcgac gaggacgaat 600 taaaagagcc aacagaggcg gctccgccac cggaacaata caccttgtac caggtactca 660 ttgagtgtcc tgagtgtaat aagacaattc ggctgacgtg cgcggcacaa gcacaccaga 720 tccgtgggct agaacatcta ctgcttgacg ggctaagagt gatctgtccg cggtgtaacc 780 agaagaatgg aagatcttga agaaggtact ggcgaaggtt gcagtggctg gtttgataga 840 gaagctattt gtagtgacgg gtctagtgat gaggagccaa atgagtcctt tgaatctatt 900 gcggacatgt tcgatgacgg aacacaaaca cagggcaatt ccctagagtt gttccatacc 960 caggaaaagg aggagactag gacacagata caagctctaa agcgaaagta cattcccagt 1020 ccagaggcag gtggggatct ctcaccacgg ctgagggcta tctctattac ccccaaaaaa 1080 aagaaaccta gcagacggtt gtttgagacc ccagaggata gcggcaacgg gagtcttggg 1140 aatgagacta cagatacttc ttcggggttt caggtagtag gggactcagc tgtggatgta 1200 tgcgatgcgg ggcggctgct taatctgaat ctgcttcaaa gccataatag ggtggcgagg 1260 ttgcttgctg tcttcaagga agcttatggg gtgtcataca aagagcttac acgggagtac 1320 aagagcgata aaacctgcaa tccagattgg gttatcgcat tgtactcctt gagtgagccc 1380 atcctaaatg cggcgcggac aacactacag ggaatttgtg agtatgtgtt tatgcaaagc 1440 cgccctacag cggcagccac agttgcttta ctaactgttc gctttaaatg cagtaaaagc 1500 agggagacag taagaaaaca aatgtgcggc atgttccact cagatccgct actctgcctg 1560 tgtgatcccc ccaaggtcca aagtgtgcct gcagctctat actggtataa gagcagcatg 1620 tatagtggga cattcacaca cggagaggcg cctgagtgga tcaagagaca gaccatgatt 1680 acctgtgcaa tggaagagac taaatttgac ctttcagaaa tggtgcagtg ggcatatgac 1740 aataactatg aggacgaatc ccaaatagca tttgaatatg ctagaacagc cactgagagc 1800 cctaatgcga atgcctggct ggcttccaat gcacaagcta aacatgtgag ggactgtgct 1860 acaatggtga ggcattataa acgggcggag atgaaggcta tgagtatgtc acagtgggta 1920 tggaagtgct gtagagagga acctgaggag ggcacttgga cacctatttc cctatatctc 1980 gcgtccgaag gggtggaagt gataagattt ctatctgcta tgaagagttg gttgcggggg 2040 attccaaaga aaaattgtct ggtattttac ggccctccaa atacagggaa gagtctgttt 2100 actatgagcc ttattaagtt tttgagaggg cgagttatat catttgccaa tagcaaaagc 2160 catttctgga tgcagccact ggctgaggca aaggtagtgc ttttagatga tgccacaagg 2220 gccacatggg actatgtaga tacatatatg aggaatgcca tggatggaaa tccattatca 2280 attgattgca agtatagaac acctgtgcag gtaaaatgcc cccccatgct tgtcacaaca 2340 aatgaggatg tgcacttgaa tgataggtgg cgctaccttc atagcagaat acaagtcttt 2400 cacttaaagg aacctatgcc tatagacact gccggtaacc cagagtattc cttctctaat 2460 agacattgga aggcgttttt cgaaaagtta cagaagccac tagatctaag cgaggacgag 2520 ggtgacccca aggacaatgg agagcataca cagccgttta gctgctgtgc aagaggaact 2580 gatgtgcatg tatgaggatg gggaggagac actggaggcc cagcttaaac attggggctt 2640 gttgaggaaa gagcaagtct tgttacatgc agcacgccag catggacata acaaaatagg 2700 actgcaggcc gtgccccctc tttcagtgac ccagcagaat gccaagaatg ctattgaaat 2760 gcatttgctg ttgcaaagtc ttgcagagac accatatgct agggaagcat ggacactaag 2820 ccagaccagc agggaaatgt atatggcagg tccatccggc accttcaaga aagacggcac 2880 cattgtggag gttatatttg atggtgacaa gactaatatg atgacatata caaagtgggg 2940 gaagatatac tttgctgatc caaatggcaa ttggagcaga acaacctccc atacggacat 3000 taatggcata tattttaata agtctgggga taaggagtac tatgtgcggt tcaaagagga 3060 agcaaagagg tactcattaa caggaacttg ggaagtacat gatggactag agacacattc 3120 ccttcttatt cctgtcacca gctctacacc gcagaccgga tttcctagag gggatccggt 3180 acgccttcac gggaatacca ccacaggact gcccataccg cttcggaaca gcagcagcaa 3240 ccagatatta ctacgagagg gaagaggaga ctatccagac ggcgcacgcc gcgagacgag 3300 gaggtactac caggggccaa caccgacgcc caggtctcta tctcccccca tctaccgtcc 3360 cccgccaagc tacgaagagt cgaggaggag gaggaagcta aggcgccgcc aagacgggcg 3420 agtcaaatac cccgcgtctc cctacaggac aaaaccaccg ggggaaacca gcagcgacga 3480 cgaagacgag gggagagggg ggcacgaacc ccgtccccag agacgactgc ccagaggcct 3540 aagagaccgc ggagagcgtg cacccgaaag gaggagaccc ccagttcagg agggggagga 3600 ggacgtggac ggcgtagggg ccttgctgga cgacctgaag ctgtaccaag aaccacctgg 3660 agacccagtg gaggactcgg actccccagg cagtcgtctt acccccgccc cgccagacct 3720 atctcggtac gactctaccc ggttacaggt ggacgcggag agcagccctc ctaggacacc 3780 cagaccggcc cccactctcg tggcagagtg cactcctggg agaccttctc cgcagactgg 3840 aagcggacag caagcactgg gagaaccgcc ttctcggcct tcacgcggac attgccgcga 3900 ccctcggact gcctgccttt tgatcatcaa aggatcatca aatcaggtta agtgcttgcg 3960 atttagactt aaatcctggc atcacagcct gttttcctac atcagcacca catggcagtg 4020 ggttccttca gtaggaagta ataggattgg acggtcacgc attctggtga tgtgtgagga 4080 ctcagcgcag atggacagat tcctatgtac tgttaagatc cctgctggta tgacagttga 4140 acagtgcagc atggcgtctg tctgatgccc ccccccctcg cataacatac taacgcacac 4200 tgcaataaag tttttccttt acacagtact aacctactaa tattagcatg tctagaagga 4260 gaaagcgaca tacacgagtc cctcgtgact cggccactca catatatcaa acatgtaagc 4320 aggcaggcac atgtccgcct gatgtagtta ataaagttga aggcacaacc acagctgata 4380 agattcttca atatggcggg gcggctgtat tcctcggtgg ccttggtatt ggtacaggta 4440 ggggaagtgg tggtgcaaca gggtatgtac cggtcggcga gacacctggt atttccgtgg 4500 gtgcaagacc agttcctcga cctaatgtgc ccttagaaac tgttggtccc caggacctgt 4560 ttcctgtgga tgccattagg cctactgatc cttcggtgat tgatgtcgcc agtgtgccta 4620 ctcccactga cacctctatt aatgtacccg aggtggaggt cattgctgag atccaccctg 4680 tacctcctga cggtccctcc aacacaccaa caaccacaat taacacatca ggctcagggg 4740 atgcagccat attagaggta gctcctgaac catccccagc cgtcaggact cggtggagag 4800 ctagcaagac aaccttccat aatcctgcct ttcacagctt ctcctctact ggttcaactg 4860 taggcgaggc cacaggtatg gacaatattg ttgtttacag cggtagtggg gggaggacga 4920 taggtgggga cagcatagag cttatgccct ttactagcag tgatacccta gatttaagta 4980 ttgtggagga gacctccttt ggaggtagga ccagcacacc acgaaccaag cccctccctt 5040 ctcggttgcc ttcccggagg tattatgaat atagagaaag cagtcttggt gagttatggt 5100 cacctaggag ggctatgggt cccacgtata taaatcctgc ctttgaagct gaggatagta 5160 tcctttttcc tgaatgtagc atgcaggccg ctaatccaga ttacacaggc attaccaggc 5220 ttggtcatct ctttggtact gagcagggtg gccgtgtccg tattggtcgt ctgggacaaa 5280 agacatccct gcacacacgc agcggtatgg caataggccc taaggcatac ttttataagg 5340 acatttctag catttctgtt gtcccagagg agagtataga actcagcacc tatacctcag 5400 ctgccccttt gggtgaggat gcaggtataa tagtggagga ctctatggag ggttcttttg 5460 acaatatcac cctcagttct tggagtcatg gatccatgga cgggcttctt gaggatgatg 5520 ctagttatga ttttcacggc cacctggtgt ggggaacacg ccgtagctct aagcaaataa 5580 gcatgccatt ccgccggtcg tggtatcctg aaactgctgt gtacgtgcag gagggtgggt 5640 ctgtaatgga tcctgaggct tctgcagagc tggttcccag tagggacagt gctcgtcccc 5700 atgtcatata taggggctat aatgggacgg actattatct acacccgtca ttgtccagac 5760 gcaggcgtaa cagcaggcat atctattttt cagatggcgt actggctgcc taataaccag 5820 aagttgtacc tgcccccggc cccggtgcag cgcatactgt ctacagatga atttactaca 5880 cgaacagaca tatattacta tgctagtagt gacaggttat taactgttgg taatccatat 5940 tatcctatac tggatgggga tactgttact gttcctaagg tcagtcctaa tcaatacagg 6000 gtgttccgtt gtaaattacc ggaccctaac cggtttgcat ttggtgagaa gtcggtttac 6060 gaccctgaga agcaacggct tgcatggtgt atacggggag tggagatagc tcgtggccaa 6120 cctctgggaa tagggattac tgggcatccc ctatataaca ggctagagga tgtggagaac 6180 cctggaaagt atccatctgc tccgggcacg gacaatagac aaaatgtagg ccttgatccg 6240 aagcagactc agatgtttat tgtcggttgt gtacctgcac agggtgagca ctggagtaga 6300 gcacttacct gcagcaatca ggtggttaag aagggtgact gtccacctat tcagcggatg 6360 tctgggatga ttgaggatgg tgacatgggg gacataggtt atggcaactt agacttccga 6420 gtgttgcagg aaaacaagtc agaggttccc ctcgaggtag ttgactctat ctgtaagtac 6480 cccgattatt taggaatgtc caaggaaacc cacggcaact catgcttctt ctatgctagg 6540 caggcgagat tatacagcag gcacttcttt aaccgtgcag gtgttcaggg tgagactgtg 6600 ccggagtcat tatacaagaa gggcaaggat ggacaggcac agagcacact ggcactagct 6660 acatactcag ggactccgtc agggtcacta gtgtcatctg atgctgtact gttcaaccgt 6720 ccatactggc ttgagagggc acaaggacaa aacaatggca ttctgtggaa taatgatttg 6780 ttcgtgaccg tgctggacaa cactcgtggg acccatttct ccatcagcat tgctacacag 6840 gatgaaaatg attacaccgc ctcaaactac aagcaatata ctcgacatgt tgaagaattt 6900 gagcttgaat ttattttcca actggttaag atcaaccttt ctactgaggt gctagcatac 6960 ctgcatggga tggacccatc tatactggat aactggaact tgactctggg accccccaat 7020 gatggtagcc ttgctgataa gtacagattt atagaatccc ttgctacaaa atgccctgac 7080 aatgtggaag tcactaagcc tgatccctac aaaggacgga tattctggaa cattgacctg 7140 actgaaagac tgacagctga tctggaccaa ttctcacttg gacggaagtt cctctaccag 7200 cacgcgcgaa tttcaaaccg taaacggtcc cttcctgctt ccagaaacgg cggcggaacc 7260 tcctcctctt ccaccaagcg gagaaaaaaa tagttggaat aaagactgct gacactgcac 7320 ttgtgtcccg ccttttctta atcccgcctt tgctggggct gcagtacagc acgctgccaa 7380 gtttatggga ggtgctggaa cactgggcgg tgcttggatc cggaatgcgc cgccttggaa 7440 gccagcgcca gtcttgttca gacaccgaga cgccaggtgt gcagcttcat tggtgcaccg 7500 tgccaggtat acctctttcg gtgcagttct tatgccaagt ctattgttgc tttttgccaa 7560 ctcggtgagt aacatcctgc ttggcactgt ctgcgacgta cctgctgcag agacttgtac 7620 cgggtgcggt acttggcagt acaaacacaa ttaggtttgg acaagaccga tatgggtgtg 7680 aatgttg 7687